STRINGSTRING
dgaF dgaF selA_2 selA_2 manZ_2 manZ_2 agaC_2 agaC_2 levE levE CAQ99882.1 CAQ99882.1 CAQ99883.1 CAQ99883.1 agaR agaR kbaZ kbaZ agaV agaV agaW agaW manZ_1 manZ_1 agaF_1 agaF_1 agaA agaA agaS agaS kbaY kbaY agaB agaB agaC agaC agaD agaD agaI agaI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dgaFConserved hypothetical protein; Homologs of previously reported genes of unknown function. (250 aa)
selA_2Putative transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (369 aa)
manZ_2Mannose permease IID component; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (285 aa)
agaC_2Putative phosphotransferase system enzyme IIC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (249 aa)
levEPutative PTS system protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (161 aa)
CAQ99882.1Putative phosphotransferase system enzyme IIA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (142 aa)
CAQ99883.1Putative NtrC family transcriptional regulators, ATPase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (946 aa)
agaRDNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator. (269 aa)
kbaZTagatose 6-phosphate aldolase 1, kbaZ subunit; Component of the tagatose-1,6-bisphosphate aldolase KbaYZ that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of KbaY. When expressed alone, KbaZ does not show any aldolase activity. Is involved in the catabolism of N-acetylgalactosamine and D- galactosamine. (426 aa)
agaVN-acetylgalactosamine-specific enzyme IIB component of PTS; Function experimentally demonstrated in the studied species; transporter. (157 aa)
agaWPutative enzyme IIC component of PTS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (259 aa)
manZ_1Putative hexose/hexosamine family PTS permease IID component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (294 aa)
agaF_1N-acetylgalactosamine-specific PTS system EIIA component 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (144 aa)
agaAN-acetylglucosamine-6-phosphate deacetylase (GlcNAc 6-P deacetylase); Function of strongly homologous gene; enzyme. (384 aa)
agaSTagatose-6-phosphate ketose/aldose isomerase; Catalyzes the isomerization-deamination of galactosamine 6- phosphate to form tagatofuranose 6-phosphate and ammonium ion. Belongs to the SIS family. AgaS subfamily. (384 aa)
kbaYTagatose 6-phosphate aldolase 1, kbaY subunit; Catalytic subunit of the tagatose-1,6-bisphosphate aldolase KbaYZ, which catalyzes the reversible aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to produce tagatose 1,6-bisphosphate (TBP). Requires KbaZ subunit for full activity and stability. Is involved in the catabolism of N-acetylgalactosamine and D- galactosamine. (286 aa)
agaBN-acetylgalactosamine-specific enzyme IIB component of PTS; Function experimentally demonstrated in the studied species; transporter. (158 aa)
agaCN-acetylgalactosamine-specific enzyme IIC component of PTS; Function experimentally demonstrated in the studied species; transporter. (267 aa)
agaDN-acetylgalactosamine-specific enzyme IID component of PTS; Function experimentally demonstrated in the studied species; transporter. (263 aa)
agaIGalactosamine-6-phosphate isomerase; Function experimentally demonstrated in the studied species; enzyme. (251 aa)
Your Current Organism:
Escherichia coli IAI1
NCBI taxonomy Id: 585034
Other names: E. coli IAI1, Escherichia coli str. IAI1, Escherichia coli strain IAI1
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