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| | moaA | Molybdopterin biosynthesis protein A; Function experimentally demonstrated in the studied species; enzyme. (329 aa) |
| | dinG | ATP-dependent DNA helicase; Function experimentally demonstrated in the studied species; enzyme. (716 aa) |
| | ybiY | Putative AdoMet-dependent glycyl radical activating enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (308 aa) |
| | yliG | Putative AdoMet-dependent methyltransferase, UPF0004 family; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (441 aa) |
| | rumB | 23S rRNA m(5)U747 methyltransferase; Function experimentally demonstrated in the studied species; enzyme. (375 aa) |
| | dmsA | Dimethyl sulfoxide reductase, anaerobic, subunit A; Function experimentally demonstrated in the studied species; enzyme. (814 aa) |
| | dmsB | Dimethyl sulfoxide reductase, anaerobic, subunit B; Function experimentally demonstrated in the studied species; enzyme. (205 aa) |
| | pflA | Pyruvate formate lyase activating enzyme 1; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (246 aa) |
| | hyaA | Hydrogenase 1, small subunit; Function experimentally demonstrated in the studied species; enzyme. (372 aa) |
| | narG | Nitrate reductase 1, alpha subunit; Function experimentally demonstrated in the studied species; enzyme. (1247 aa) |
| | acnA | Aconitate hydratase 1; Function experimentally demonstrated in the studied species; enzyme. (891 aa) |
| | fnr | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth; Function experimentally demonstrated in the studied species; regulator. (250 aa) |
| | ydaO | Putative C32 tRNA thiolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (311 aa) |
| | ydbK | Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1174 aa) |
| | narZ | Nitrate reductase 2 (NRZ), alpha subunit; Function experimentally demonstrated in the studied species; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1246 aa) |
| | fdnG | Formate dehydrogenase-N, alpha subunit, nitrate-inducible; Function experimentally demonstrated in the studied genus; enzyme. (1015 aa) |
| | fdnH | Formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. (294 aa) |
| | ydeP | Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (759 aa) |
| | ynfE | Oxidoreductase subunit; Function experimentally demonstrated in the studied species; enzyme. (808 aa) |
| | ynfF | Oxidoreductase subunit; Function experimentally demonstrated in the studied species; enzyme. (807 aa) |
| | ynfG | Oxidoreductase, Fe-S subunit; Function experimentally demonstrated in the studied species; carrier. (205 aa) |
| | fumA | Fumarate hydratase (fumarase A), aerobic Class I; Function experimentally demonstrated in the studied species; enzyme. (548 aa) |
| | rsxB | Putative iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (192 aa) |
| | rsxC | Putative 4Fe-4S ferredoxin-type protein fused with unknown protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (708 aa) |
| | nth | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III); DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (211 aa) |
| | ydhX | Putative 4Fe-4S ferridoxin-type subunit of oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (222 aa) |
| | ydhV | Putative ferredoxin:oxidoreductase subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (700 aa) |
| | ydhY | Putative 4Fe-4S ferridoxin-type subunit of oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (208 aa) |
| | sufB | Component of SufBCD complex; Function of strongly homologous gene; putative transporter. (495 aa) |
| | sdaA | L-serine deaminase I; Function experimentally demonstrated in the studied species; enzyme. (454 aa) |
| | edd | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (603 aa) |
| | yeiA | Putative oxidoreductase subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (411 aa) |
| | ispH | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. (316 aa) |
| | fixX | Putative 4Fe-4S ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (95 aa) |
| | leuC | 3-isopropylmalate isomerase subunit, dehydratase component; Function experimentally demonstrated in the studied species; enzyme. (466 aa) |
| | acnB | Bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase; Function experimentally demonstrated in the studied species; enzyme. (865 aa) |
| | yagS | Putative oxidoreductase with FAD-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (318 aa) |
| | yjjW | Putative pyruvate formate lyase activating enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (287 aa) |
| | nrdG | Anaerobic ribonucleotide reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (154 aa) |
| | yjeS | Putative Fe-S electron transport protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (379 aa) |
| | frdB | Fumarate reductase (anaerobic), Fe-S subunit; Function experimentally demonstrated in the studied species; carrier. (244 aa) |
| | yjeK | Putative lysine aminomutase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (342 aa) |
| | fumB | Anaerobic class I fumarate hydratase (fumarase B); Function experimentally demonstrated in the studied species; enzyme. (548 aa) |
| | phnJ | Carbon-phosphorus lyase complex subunit; Function experimentally demonstrated in the studied species; enzyme. (281 aa) |
| | fdhF | Formate dehydrogenase-H, selenopolypeptide subunit; Function experimentally demonstrated in the studied genus; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (715 aa) |
| | nrfC | Formate-dependent nitrite reductase, 4Fe4S subunit; Function experimentally demonstrated in the studied species; carrier. (223 aa) |
| | thiC | Thiamin (pyrimidine moiety) biosynthesis protein; Function experimentally demonstrated in the studied species; enzyme. (631 aa) |
| | thiH | Thiamin biosynthesis ThiGH complex subunit; Function experimentally demonstrated in the studied species; enzyme. (377 aa) |
| | pflC | Pyruvate formate lyase II activase; Function experimentally demonstrated in the studied species; enzyme. (292 aa) |
| | fdoG | Formate dehydrogenase-O, large subunit; Function experimentally demonstrated in the studied genus; enzyme. (1016 aa) |
| | fdoH | Formate dehydrogenase-O, Fe-S subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. (300 aa) |
| | hemN | Coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent; Function experimentally demonstrated in the studied species; enzyme; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (457 aa) |
| | gntY | Putative gluconate transport associated protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (191 aa) |
| | nirB | Nitrite reductase, large subunit, NAD(P) H-binding; Function experimentally demonstrated in the studied species; enzyme. (847 aa) |
| | gltD | Glutamate synthase, 4Fe-4S protein, small subunit; Function experimentally demonstrated in the studied species; carrier. (472 aa) |
| | yhcC | Putative Fe-S oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (309 aa) |
| | yhbV | Protease; Function of strongly homologous gene; enzyme. (292 aa) |
| | yhbU | Peptidase (collagenase-like); Function of strongly homologous gene; enzyme. (331 aa) |
| | tdcG | L-serine dehydratase 3; Function experimentally demonstrated in the studied species; enzyme; Belongs to the iron-sulfur dependent L-serine dehydratase family. (454 aa) |
| | ttdA | L-tartrate dehydratase, alpha subunit; Function experimentally demonstrated in the studied species; enzyme. (303 aa) |
| | ygiQ | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (739 aa) |
| | hybO | Hydrogenase 2, small subunit; Function experimentally demonstrated in the studied species; enzyme. (372 aa) |
| | hybA | Hydrogenase 2 4Fe-4S ferredoxin-type component; Function experimentally demonstrated in the studied species; putative carrier. (328 aa) |
| | glcF | Glycolate oxidase iron-sulfur subunit; Function experimentally demonstrated in the studied species; carrier. (407 aa) |
| | mutY | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (350 aa) |
| | yggW | Putative oxidoreductase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (378 aa) |
| | ygfT | Fused putative oxidoreductase: Fe-S subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (639 aa) |
| | ygfK | Putative oxidoreductase, Fe-S subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (1032 aa) |
| | sdaB | L-serine deaminase II; Function experimentally demonstrated in the studied species; enzyme; Belongs to the iron-sulfur dependent L-serine dehydratase family. (455 aa) |
| | rumA | 23S rRNA (uracil-5)-methyltransferase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (433 aa) |
| | ygcF | Conserved hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (223 aa) |
| | cysI | Sulfite reductase, beta subunit, NAD(P)-binding, heme-binding; Function experimentally demonstrated in the studied species; enzyme. (570 aa) |
| | hycB | Hydrogenase 3, Fe-S subunit; Function experimentally demonstrated in the studied species; carrier. (203 aa) |
| | hycF | Formate hydrogenlyase complex iron-sulfur protein; Function experimentally demonstrated in the studied species; carrier. (180 aa) |
| | hycG | Hydrogenase 3 and formate hydrogenase complex, HycG subunit; Function experimentally demonstrated in the studied species; enzyme. (255 aa) |
| | hydN | Formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit; Function experimentally demonstrated in the studied species; carrier. (175 aa) |
| | yfgB | Putative Fe-S containing enzyme; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. (384 aa) |
| | ispG | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Function experimentally demonstrated in the studied species; enzyme. (372 aa) |
| | hyfI | Hydrogenase 4, Fe-S subunit; Function experimentally demonstrated in the studied species; carrier. (252 aa) |
| | hyfH | Hydrogenase 4, Fe-S subunit; Function experimentally demonstrated in the studied species; carrier. (179 aa) |
| | aegA | Fused putative oxidoreductase: FeS binding subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (659 aa) |
| | nuoB | NADH:ubiquinone oxidoreductase, chain B; Function experimentally demonstrated in the studied species; carrier; Belongs to the complex I 20 kDa subunit family. (220 aa) |
| | nuoF | NADH:ubiquinone oxidoreductase, chain F; Function experimentally demonstrated in the studied species; carrier. (445 aa) |
| | nuoG | NADH:ubiquinone oxidoreductase, chain G; Function experimentally demonstrated in the studied species; carrier. (910 aa) |
| | nuoI | NADH:ubiquinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (180 aa) |
| | glpC | Sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit; Function experimentally demonstrated in the studied species; enzyme. (396 aa) |
| | napF | Ferredoxin-type protein, putative role in electron transfer to periplasmic nitrate reductase (NapA); Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family. (164 aa) |
| | napA | Nitrate reductase, periplasmic, large subunit; Function experimentally demonstrated in the studied species; enzyme. (828 aa) |
| | napG | Ferredoxin-type protein NapG (Periplasmic nitrate reductase); Function experimentally demonstrated in the studied species; carrier. (231 aa) |
| | napH | Quinol dehydrogenase ferredoxin subunit NapH; Function experimentally demonstrated in the studied species; carrier. (287 aa) |
| | yeiL | DNA-binding transcriptional activator of stationary phase nitrogen survival; Function experimentally demonstrated in the studied species; regulator. (219 aa) |
| | lipA | Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (321 aa) |
| | miaB | Isopentenyl-adenosine A37 tRNA methylthiolase; Function experimentally demonstrated in the studied species; enzyme. (474 aa) |
| | sdhB | Succinate dehydrogenase, FeS subunit; Function experimentally demonstrated in the studied species; carrier. (238 aa) |
| | nadA | Quinolinate synthase, subunit A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily. (347 aa) |
| | bioB | Biotin synthase; Function experimentally demonstrated in the studied species; enzyme. (346 aa) |
