(11 nodes) Pseudouridine synthase, catalytic domain superfamily network (Escherichia coli IAI1)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Your Input:
	truD	Pseudoruidine synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. (349 aa)
	rluA	Pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32); Function experimentally demonstrated in the studied species; enzyme. (219 aa)
	rluC	23S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (319 aa)
	ymfC	23S rRNA pseudouridine synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family. (217 aa)
	rluB	23S rRNA pseudouridylate synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family. (299 aa)
	rsuA	16S rRNA pseudouridylate 516 synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family. (231 aa)
	truA	Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (270 aa)
	yjbC	23S rRNA pseudouridine synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family. (290 aa)
	truB	tRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (314 aa)
	truC	tRNA pseudouridine synthase; Function experimentally demonstrated in the studied species; enzyme. (260 aa)
	rluD	23S rRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (326 aa)

Your Current Organism:

Escherichia coli IAI1

NCBI taxonomy Id: 585034
Other names: E. coli IAI1, Escherichia coli str. IAI1, Escherichia coli strain IAI1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rluA	rluB	ECIAI1_0058	ECIAI1_1287	Pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32); Function experimentally demonstrated in the studied species; enzyme.	23S rRNA pseudouridylate synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	0.819
rluA	rsuA	ECIAI1_0058	ECIAI1_2265	Pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32); Function experimentally demonstrated in the studied species; enzyme.	16S rRNA pseudouridylate 516 synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	0.860
rluA	truA	ECIAI1_0058	ECIAI1_2395	Pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32); Function experimentally demonstrated in the studied species; enzyme.	Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.840
rluA	truB	ECIAI1_0058	ECIAI1_3316	Pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32); Function experimentally demonstrated in the studied species; enzyme.	tRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.837
rluA	truD	ECIAI1_0058	ECIAI1_2846	Pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32); Function experimentally demonstrated in the studied species; enzyme.	Pseudoruidine synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.	0.911
rluA	yjbC	ECIAI1_0058	ECIAI1_4244	Pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32); Function experimentally demonstrated in the studied species; enzyme.	23S rRNA pseudouridine synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	0.886
rluA	ymfC	ECIAI1_0058	ECIAI1_1173	Pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32); Function experimentally demonstrated in the studied species; enzyme.	23S rRNA pseudouridine synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	0.725
rluB	rluA	ECIAI1_1287	ECIAI1_0058	23S rRNA pseudouridylate synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	Pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32); Function experimentally demonstrated in the studied species; enzyme.	0.819
rluB	rluC	ECIAI1_1287	ECIAI1_1121	23S rRNA pseudouridylate synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	23S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	0.742
rluB	rluD	ECIAI1_1287	ECIAI1_2717	23S rRNA pseudouridylate synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	23S rRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	0.676
rluB	truB	ECIAI1_1287	ECIAI1_3316	23S rRNA pseudouridylate synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	tRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.454
rluC	rluB	ECIAI1_1121	ECIAI1_1287	23S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	23S rRNA pseudouridylate synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	0.742
rluC	truD	ECIAI1_1121	ECIAI1_2846	23S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Pseudoruidine synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.	0.553
rluC	ymfC	ECIAI1_1121	ECIAI1_1173	23S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	23S rRNA pseudouridine synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	0.716
rluD	rluB	ECIAI1_2717	ECIAI1_1287	23S rRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	23S rRNA pseudouridylate synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	0.676
rluD	rsuA	ECIAI1_2717	ECIAI1_2265	23S rRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	16S rRNA pseudouridylate 516 synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	0.724
rluD	truA	ECIAI1_2717	ECIAI1_2395	23S rRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.465
rluD	truB	ECIAI1_2717	ECIAI1_3316	23S rRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	tRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.751
rluD	truD	ECIAI1_2717	ECIAI1_2846	23S rRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Pseudoruidine synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.	0.553
rluD	yjbC	ECIAI1_2717	ECIAI1_4244	23S rRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	23S rRNA pseudouridine synthase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the pseudouridine synthase RsuA family.	0.649