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| | yfiE | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (293 aa) |
| | csiR | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator. (220 aa) |
| | ygaV | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (99 aa) |
| | mprA | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; Function experimentally demonstrated in the studied species; regulator. (176 aa) |
| | recX | Regulatory protein for RecA; Modulates RecA activity; Belongs to the RecX family. (166 aa) |
| | srlR | DNA-bindng transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (257 aa) |
| | hosA | Transcriptional regulator hosA; Involved in the temperature-dependent positive control of flagellum-driven swimming motility and cellular aggregation. Regulates fliC expression by directly interacting with fliC promoter (By similarity). (135 aa) |
| | fucR | DNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator. (243 aa) |
| | gcvA | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (305 aa) |
| | etrA | LuxR family transcriptional regulator; Homologs of previously reported genes of unknown function. (166 aa) |
| | ygfI | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (298 aa) |
| | ygiP | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (310 aa) |
| | rpoD | RNA polymerase, sigma 70 (sigma D) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (613 aa) |
| | yqjI | Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (207 aa) |
| | exuR | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (258 aa) |
| | yhaJ | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (298 aa) |
| | tdcA | DNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (312 aa) |
| | nanR | DNA-binding transcriptional dual regulator; Transcriptional repressor that controls expression of the genes required for the catabolism of sialic acids. (263 aa) |
| | argR | DNA-binding transcriptional dual regulator, L-arginine-binding; Regulates arginine biosynthesis genes. (156 aa) |
| | aaeR | DNA-binding transcriptional regulator, efflux system; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (309 aa) |
| | smf | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; 8432722. (374 aa) |
| | crp | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator. (210 aa) |
| | frlR | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (243 aa) |
| | ompR | DNA-binding response regulator in two-component regulatory system with EnvZ; Function experimentally demonstrated in the studied species; regulator. (239 aa) |
| | yhgG | Putative DNA-binding transcriptional regulator; May function as a transcriptional regulator that controls feoABC expression. (78 aa) |
| | arsR | DNA-binding transcriptional repressor; Transcriptional repressor for the ars operon. ArsR is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsR is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arsenate (As(V)). (117 aa) |
| | ygaV_1 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (119 aa) |
| | yhiF | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (176 aa) |
| | gadE | DNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator. (175 aa) |
| | yhjC | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (323 aa) |
| | yiaU | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (324 aa) |
| | selB | selenocysteinyl-tRNA-specific translation factor; Function experimentally demonstrated in the studied species; factor. (614 aa) |
| | lldR | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (258 aa) |
| | yidP | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (238 aa) |
| | dgoR | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (229 aa) |
| | yieP | Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (230 aa) |
| | hdfR | DNA-binding transcriptional regulator; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon. (279 aa) |
| | ilvY | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (324 aa) |
| | recQ | ATP-dependent DNA helicase; Function experimentally demonstrated in the studied species; enzyme. (609 aa) |
| | metR | DNA-binding transcriptional activator, homocysteine-binding; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (317 aa) |
| | yihL | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (236 aa) |
| | yihW | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (261 aa) |
| | frvR | Putative regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (582 aa) |
| | cpxR | DNA-binding response regulator in two-component regulatory system with CpxA; Function experimentally demonstrated in the studied species; regulator. (232 aa) |
| | oxyR | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (305 aa) |
| | iclR | Fragment of regulator of acetyl CoA synthetase (part 1); Gene remnant; regulator. (274 aa) |
| | lexA | DNA-binding transcriptional repressor of SOS regulon; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (202 aa) |
| | basR | DNA-binding response regulator in two-component regulatory system with BasS; Function experimentally demonstrated in the studied species; regulator. (222 aa) |
| | cadC | DNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator. (512 aa) |
| | nsrR | DNA-binding transcriptional regulator; Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity. (141 aa) |
| | ulaR | DNA-binding transcriptional dual regulator; Represses ulaG and the ulaABCDEF operon. (251 aa) |
| | ytfH | Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (126 aa) |
| | uxuR | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (257 aa) |
| | yjiE | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (303 aa) |
| | hpaR | 4-hydroxyphenylacetate degradative operon repressor; Repressor for the homoprotocatechuate catabolic pathway hpc operon. (175 aa) |
| | creB | DNA-binding response regulator in two-component regulatory system with CreC; Function experimentally demonstrated in the studied species; regulator. (229 aa) |
| | arcA | DNA-binding response regulator in two-component regulatory system with ArcB or CpxA; Function experimentally demonstrated in the studied species; regulator. (238 aa) |
| | nhaR | DNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (301 aa) |
| | caiF | Transcriptional activator; Function experimentally demonstrated in the studied species; regulator. (131 aa) |
| | leuO | DNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (314 aa) |
| | yafC | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (304 aa) |
| | ykgK | Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (196 aa) |
| | yahA | Cyclic di-GMP phosphodiesterase; Function experimentally demonstrated in the studied species; enzyme. (362 aa) |
| | cynR | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (299 aa) |
| | mhpR | DNA-binding transcriptional activator, 3HPP-binding; Function experimentally demonstrated in the studied species; regulator. (315 aa) |
| | phoB | DNA-binding response regulator in two-component regulatory system with PhoR (or CreC); Function experimentally demonstrated in the studied species; regulator. (229 aa) |
| | ybaO | Putative DNA-binding transcriptional regulator (Lrp-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (203 aa) |
| | ybaZ | Putative methylated DNA-protein cysteine alkyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (129 aa) |
| | allR | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (271 aa) |
| | ybdO | Putative DNA-binding transcriptional regulator, LysR-type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (300 aa) |
| | ybeF | Putative DNA-binding transcriptional regulator, LysR-type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (317 aa) |
| | nagC | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine; Function experimentally demonstrated in the studied species; regulator. (406 aa) |
| | fur | DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport; Function experimentally demonstrated in the studied species; regulator; Belongs to the Fur family. (148 aa) |
| | kdpE | DNA-binding response regulator in two-component regulatory system with KdpD; Function experimentally demonstrated in the studied species; regulator. (225 aa) |
| | mngR | DNA-binding transcriptional dual regulator, fatty-acyl-binding; Function experimentally demonstrated in the studied species; regulator. (240 aa) |
| | modE | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator. (262 aa) |
| | ybhD | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (338 aa) |
| | nohB | Fragment of conserved hypothetical protein; Gene remnant; extrachromosomal origin. (181 aa) |
| | mntR | DNA-binding transcriptional regulator of mntH; Function experimentally demonstrated in the studied species; regulator. (155 aa) |
| | ycaN | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (302 aa) |
| | mukF | Involved in chromosome partioning, Ca2+ binding protein; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. (440 aa) |
| | yceH | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; 2828880; Belongs to the UPF0502 family. (215 aa) |
| | phoP | DNA-binding response regulator in two-component regulatory system with PhoQ; Function experimentally demonstrated in the studied species; regulator. (223 aa) |
| | fadR | DNA-binding transcriptional dual regulator of fatty acid metabolism; Multifunctional regulator of fatty acid metabolism. (239 aa) |
| | deoT | DNA-binding transcriptional repressor, DeoR family; Function experimentally demonstrated in the studied species; regulator. (249 aa) |
| | ycjZ | Fragment of putative hydrolase (part 1); Gene remnant; putative enzyme; Belongs to the LysR transcriptional regulatory family. (299 aa) |
| | fnr | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth; Function experimentally demonstrated in the studied species; regulator. (250 aa) |
| | abgR | DNA-binding transcriptional regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (302 aa) |
| | paaX | DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive; Function experimentally demonstrated in the studied species; regulator. (316 aa) |
| | ydcR | Putative DNA-binding transcriptional regulator fused with a domain with PLP-binding motif; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (468 aa) |
| | yncC | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (221 aa) |
| | lsrR | DNA-binding transcriptional regulator; Function experimentally demonstrated in the studied species; regulator. (317 aa) |
| | marR | DNA-binding transcriptional repressor of multiple antibiotic resistance; Function experimentally demonstrated in the studied species; regulator. (144 aa) |
| | ydfH | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (228 aa) |
| | dgsA | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (406 aa) |
| | ynfL | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (297 aa) |
| | rstA | DNA-binding response regulator in two-component regulatory system with RstB; Function experimentally demonstrated in the studied species; regulator. (242 aa) |
| | slyA | DNA-binding transcriptional activator; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family. (144 aa) |
| | ydhB | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (310 aa) |
| | yeaT | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (307 aa) |
| | kdgR | DNA-binding transcriptional repressor KdgR; Function experimentally demonstrated in the studied species; regulator. (263 aa) |
| | yebK | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (289 aa) |
| | ruvB | ATP-dependent DNA helicase, component of RuvABC resolvasome; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (336 aa) |
| | rcsA | DNA-binding transcriptional activator, co-regulator with RcsB; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes (By similarity). Involved in regulation of K30 capsular polysaccharide synthesis. (207 aa) |
| | yedW | DNA-binding response regulator in two-component system with YedV; Function experimentally demonstrated in the studied species; regulator. (223 aa) |
| | cbl | DNA-binding transcriptional activator of cysteine biosynthesis; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (316 aa) |
| | yeeY | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (309 aa) |
| | yegW | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (248 aa) |
| | yeiE | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (293 aa) |
| | yeiI | Putative kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (362 aa) |
| | ada | Fused DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator. (354 aa) |
| | rcsB | DNA-binding response regulator in two-component regulatory system with RcsC and YojN; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions. Can function both in an RcsA-dependent or RcsA-independent manner (By similarity). Involved in regulation of K30 capsular polysaccharide synthesis. (216 aa) |
| | lrhA | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (312 aa) |
| | yfeR | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (308 aa) |
| | yfeT | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (285 aa) |
| | yffI | Putative ethanolaminosome structural protein with putative role in ethanolamine utilization; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (166 aa) |
| | iscR | DNA-binding transcriptional repressor; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins. (162 aa) |
| | yphH | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (397 aa) |
| | yfhH | Fused putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (282 aa) |
| | rpoE | RNA polymerase, sigma 24 (sigma E) factor; Function experimentally demonstrated in the studied species; factor; Belongs to the sigma-70 factor family. ECF subfamily. (191 aa) |
