STRINGSTRING
ydiO ydiO ydiQ ydiQ ydiR ydiR ydiS ydiS ydiT ydiT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ydiOPutative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (383 aa)
ydiQPutative electron transfer flavoprotein subunit (etfB-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (254 aa)
ydiRPutative electron transfer flavoprotein subunit, FAD-binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (312 aa)
ydiSPutative oxidoreductase subunit with FAD/NAD(P)-binding domain; Part of an electron transfer system. Belongs to the ETF-QO/FixC family. (429 aa)
ydiTPutative 4Fe-4S ferredoxin-type oxidoreductase subunit; Could be a 3Fe-4S cluster-containing protein. (97 aa)
Your Current Organism:
Escherichia coli UMN026
NCBI taxonomy Id: 585056
Other names: E. coli UMN026
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