STRINGSTRING
yahO yahO ybgS ybgS dps dps ycaC ycaC yccJ yccJ wrbA wrbA msyB msyB ycgB ycgB ydcK ydcK yncG yncG osmC osmC ydiZ ydiZ yniA yniA yeaG yeaG yeaH yeaH yegP yegP elaB elaB ygaU ygaU ygaM ygaM yghA yghA yqjC yqjC yqjD yqjD yqjE yqjE yqjK yqjK yhbO yhbO fic fic yhfG yhfG yiaG yiaG yjbJ yjbJ osmY osmY ytjA ytjA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yahOFragment of neutral amino-acid efflux system (part 1); Gene remnant; transporter. (91 aa)
ybgSConserved hypothetical protein; Homologs of previously reported genes of unknown function. (126 aa)
dpsFe-binding and storage protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. Dps also protects the cell from UV and gamma irradiation, iron and cop [...] (167 aa)
ycaCPutative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (208 aa)
yccJConserved hypothetical protein; Homologs of previously reported genes of unknown function. (75 aa)
wrbAPutative conserved flavoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (198 aa)
msyBConserved hypothetical protein; Homologs of previously reported genes of unknown function. (124 aa)
ycgBConserved hypothetical protein; Homologs of previously reported genes of unknown function. (510 aa)
ydcKPutative enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (326 aa)
yncGPutative enzyme with similarity with GST; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (205 aa)
osmCOsmotically inducible, stress-inducible membrane protein; Function experimentally demonstrated in the studied species; membrane component. (143 aa)
ydiZConserved hypothetical protein; Homologs of previously reported genes of unknown function. (96 aa)
yniAPutative phosphotransferase/kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the fructosamine kinase family. (286 aa)
yeaGConserved hypothetical protein; Homologs of previously reported genes of unknown function. (644 aa)
yeaHConserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0229 family. (427 aa)
yegPConserved hypothetical protein; Homologs of previously reported genes of unknown function. (110 aa)
elaBConserved hypothetical protein; Homologs of previously reported genes of unknown function. (101 aa)
ygaUConserved hypothetical protein; Homologs of previously reported genes of unknown function. (149 aa)
ygaMConserved hypothetical protein; Homologs of previously reported genes of unknown function. (113 aa)
yghAPutative glutathionylspermidine synthase, with NAD(P)-binding Rossmann-fold domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (294 aa)
yqjCConserved hypothetical protein; Homologs of previously reported genes of unknown function. (122 aa)
yqjDConserved hypothetical protein; Homologs of previously reported genes of unknown function. (101 aa)
yqjEConserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (134 aa)
yqjKConserved hypothetical protein; Homologs of previously reported genes of unknown function. (99 aa)
yhbOPutative intracellular protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (172 aa)
ficStationary-phase protein, cell division; Function experimentally demonstrated in the studied species; cell process. (200 aa)
yhfGConserved hypothetical protein; Homologs of previously reported genes of unknown function. (55 aa)
yiaGPutative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (96 aa)
yjbJPutative stress response protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the UPF0337 (CsbD) family. (69 aa)
osmYPeriplasmic protein; Function experimentally demonstrated in the studied species; cell process. (201 aa)
ytjAConserved hypothetical protein; Homologs of previously reported genes of unknown function. (59 aa)
Your Current Organism:
Escherichia coli UMN026
NCBI taxonomy Id: 585056
Other names: E. coli UMN026
Server load: low (16%) [HD]