(13 nodes) GGDEF domain, and CSS motif domain associated with EAL network (Escherichia coli UMN026)

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

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Your Input:
	ylaB	Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (516 aa)
	yliE	Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (782 aa)
	yliF	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (442 aa)
	dos	cAMP phosphodiesterase, heme-regulated; Function experimentally demonstrated in the studied species; enzyme. (799 aa)
	yddV	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (347 aa)
	yeaI	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (491 aa)
	yeaJ	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (496 aa)
	yeaP	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (341 aa)
	rtn	Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (518 aa)
	yfeA	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (729 aa)
	yfgF	Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (747 aa)
	csrD	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor. (646 aa)
	yhjK	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (649 aa)

Your Current Organism:

Escherichia coli UMN026

NCBI taxonomy Id: 585056
Other names: E. coli UMN026

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
csrD	dos	ECUMN_3726	ECUMN_1743	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	cAMP phosphodiesterase, heme-regulated; Function experimentally demonstrated in the studied species; enzyme.	0.819
csrD	rtn	ECUMN_3726	ECUMN_2513	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	Conserved hypothetical protein; Homologs of previously reported genes of unknown function.	0.857
csrD	yddV	ECUMN_3726	ECUMN_1744	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.666
csrD	yeaI	ECUMN_3726	ECUMN_2074	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.702
csrD	yeaJ	ECUMN_3726	ECUMN_2075	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.738
csrD	yeaP	ECUMN_3726	ECUMN_2084	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.730
csrD	yfeA	ECUMN_3726	ECUMN_2723	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.620
csrD	yfgF	ECUMN_3726	ECUMN_2817	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component.	0.628
csrD	yhjK	ECUMN_3726	ECUMN_4036	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	0.839
csrD	yliE	ECUMN_3726	ECUMN_1021	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component.	0.696
csrD	yliF	ECUMN_3726	ECUMN_1022	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.689
dos	csrD	ECUMN_1743	ECUMN_3726	cAMP phosphodiesterase, heme-regulated; Function experimentally demonstrated in the studied species; enzyme.	Inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways; Function experimentally demonstrated in the studied species; factor.	0.819
dos	rtn	ECUMN_1743	ECUMN_2513	cAMP phosphodiesterase, heme-regulated; Function experimentally demonstrated in the studied species; enzyme.	Conserved hypothetical protein; Homologs of previously reported genes of unknown function.	0.521
dos	yddV	ECUMN_1743	ECUMN_1744	cAMP phosphodiesterase, heme-regulated; Function experimentally demonstrated in the studied species; enzyme.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.994
dos	yeaI	ECUMN_1743	ECUMN_2074	cAMP phosphodiesterase, heme-regulated; Function experimentally demonstrated in the studied species; enzyme.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.504
dos	yeaJ	ECUMN_1743	ECUMN_2075	cAMP phosphodiesterase, heme-regulated; Function experimentally demonstrated in the studied species; enzyme.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.864
dos	yeaP	ECUMN_1743	ECUMN_2084	cAMP phosphodiesterase, heme-regulated; Function experimentally demonstrated in the studied species; enzyme.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.951
dos	yfeA	ECUMN_1743	ECUMN_2723	cAMP phosphodiesterase, heme-regulated; Function experimentally demonstrated in the studied species; enzyme.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.757
dos	yfgF	ECUMN_1743	ECUMN_2817	cAMP phosphodiesterase, heme-regulated; Function experimentally demonstrated in the studied species; enzyme.	Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component.	0.756
dos	yhjK	ECUMN_1743	ECUMN_4036	cAMP phosphodiesterase, heme-regulated; Function experimentally demonstrated in the studied species; enzyme.	Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	0.749