STRINGSTRING
ydbA ydbA CAR13017.1 CAR13017.1 CAR13018.1 CAR13018.1 CAR13019.1 CAR13019.1 CAR13020.1 CAR13020.1 CAR13021.1 CAR13021.1 CAR13022.1 CAR13022.1 CAR13023.1 CAR13023.1 CAR13024.1 CAR13024.1 CAR13025.1 CAR13025.1 CAR13026.1 CAR13026.1 CAR13027.1 CAR13027.1 CAR13028.1 CAR13028.1 CAR13029.1 CAR13029.1 CAR13030.1 CAR13030.1 CAR13031.1 CAR13031.1 CAR13033.1 CAR13033.1 CAR13034.1 CAR13034.1 CAR14006.1 CAR14006.1 CAR14122.1 CAR14122.1 CAR14132.1 CAR14132.1 CAR14133.1 CAR14133.1 CAR14138.1 CAR14138.1 CAR14436.1 CAR14436.1 CAR14437.1 CAR14437.1 CAR14438.1 CAR14438.1 CAR14439.1 CAR14439.1 CAR14440.1 CAR14440.1 CAR14452.1 CAR14452.1 assT assT dsbA dsbA dsbI dsbI yjhR yjhR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ydbAPutative autotransported outer membrane protein involved in cell adhesion; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (1939 aa)
CAR13017.1Host specificity protein J; Function of strongly homologous gene; extrachromosomal origin. (1132 aa)
CAR13018.1Tail assembly protein I from putative prophage; Function of strongly homologous gene; extrachromosomal origin. (215 aa)
CAR13019.1Putative tail fiber component K of prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (250 aa)
CAR13020.1Minor tail protein L; Function of strongly homologous gene; extrachromosomal origin. (232 aa)
CAR13021.1Minor tail protein M; Function of strongly homologous gene; extrachromosomal origin. (109 aa)
CAR13022.1Putative tail length tape measure protein from putative prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (1031 aa)
CAR13023.1Putative minor tail protein T of putative prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (109 aa)
CAR13024.1Putative minor tail component of putative prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (142 aa)
CAR13025.1Major tail protein V; Function of strongly homologous gene; extrachromosomal origin. (249 aa)
CAR13026.1Minor tail protein U; Function of strongly homologous gene; extrachromosomal origin. (137 aa)
CAR13027.1Minor tail protein Z (GPZ) of prophage; Function of strongly homologous gene; extrachromosomal origin. (192 aa)
CAR13028.1Conserved hypothetical protein from putative prophage; Homologs of previously reported genes of unknown function; extrachromosomal origin. (91 aa)
CAR13029.1Conserved hypothetical protein from putative prophage; Homologs of previously reported genes of unknown function; extrachromosomal origin. (122 aa)
CAR13030.1Putative ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin; Belongs to the peptidase S14 family. (706 aa)
CAR13031.1Putative portal protein (head-tail preconnector protein) from putative prophage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (526 aa)
CAR13033.1Putative DNA packaging protein of putative prophage (terminase large subunit); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (700 aa)
CAR13034.1Conserved hypothetical protein from putative prophage; Homologs of previously reported genes of unknown function; extrachromosomal origin. (164 aa)
CAR14006.1Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (735 aa)
CAR14122.1Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin. (689 aa)
CAR14132.1Putative dehydrogenase from bacteriophage origin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (337 aa)
CAR14133.1Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin. (417 aa)
CAR14138.1Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (564 aa)
CAR14436.1Conserved hypothetical protein with PD1-like DNA-binding motif; Homologs of previously reported genes of unknown function. (143 aa)
CAR14437.1Putative ABC-type transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (225 aa)
CAR14438.1Putative ABC-type transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (235 aa)
CAR14439.1Putative ATP-binding protein of ABC transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (227 aa)
CAR14440.1Putative ATP-binding protein of ABC transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (236 aa)
CAR14452.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (243 aa)
assTArylsulfate sulfotransferase; Catalyzes the transfer of sulfuryl groups between phenolic compounds. (598 aa)
dsbAThiol:disulfide interchange protein dsbA precursor; Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT. (222 aa)
dsbIPutative protein-disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT. (223 aa)
yjhRFragment of Putative superfamily I DNA helicase (part 1); Gene remnant; putative enzyme. (338 aa)
Your Current Organism:
Escherichia coli UMN026
NCBI taxonomy Id: 585056
Other names: E. coli UMN026
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.