10 items (Escherichia coli UMN026) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ydbA	Putative autotransported outer membrane protein involved in cell adhesion; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (1939 aa)
	CAR14006.1	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (735 aa)
	CAR14122.1	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin. (689 aa)
	CAR14133.1	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin. (417 aa)
	CAR14138.1	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (564 aa)
	CAR14452.1	Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (243 aa)
	assT	Arylsulfate sulfotransferase; Catalyzes the transfer of sulfuryl groups between phenolic compounds. (598 aa)
	dsbA	Thiol:disulfide interchange protein dsbA precursor; Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT. (222 aa)
	dsbI	Putative protein-disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT. (223 aa)
	yjhR	Fragment of Putative superfamily I DNA helicase (part 1); Gene remnant; putative enzyme. (338 aa)

Your Current Organism:

Escherichia coli UMN026

NCBI taxonomy Id: 585056
Other names: E. coli UMN026

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAR14006.1	CAR14122.1	ECUMN_2829	ECUMN_2951	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	0.558
CAR14006.1	CAR14133.1	ECUMN_2829	ECUMN_2962	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	0.766
CAR14006.1	CAR14138.1	ECUMN_2829	ECUMN_2967	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.768
CAR14006.1	CAR14452.1	ECUMN_2829	ECUMN_3289	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Conserved hypothetical protein; Homologs of previously reported genes of unknown function.	0.675
CAR14006.1	assT	ECUMN_2829	ECUMN_3523	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Arylsulfate sulfotransferase; Catalyzes the transfer of sulfuryl groups between phenolic compounds.	0.443
CAR14006.1	dsbA	ECUMN_2829	ECUMN_3524	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Thiol:disulfide interchange protein dsbA precursor; Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT.	0.703
CAR14006.1	dsbI	ECUMN_2829	ECUMN_3525	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Putative protein-disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT.	0.748
CAR14006.1	ydbA	ECUMN_2829	ECUMN_1651	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Putative autotransported outer membrane protein involved in cell adhesion; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.	0.772
CAR14006.1	yjhR	ECUMN_2829	ECUMN_4911	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Fragment of Putative superfamily I DNA helicase (part 1); Gene remnant; putative enzyme.	0.660
CAR14122.1	CAR14006.1	ECUMN_2951	ECUMN_2829	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.558
CAR14122.1	CAR14133.1	ECUMN_2951	ECUMN_2962	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	0.697
CAR14122.1	CAR14138.1	ECUMN_2951	ECUMN_2967	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.723
CAR14122.1	dsbA	ECUMN_2951	ECUMN_3524	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	Thiol:disulfide interchange protein dsbA precursor; Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT.	0.478
CAR14122.1	dsbI	ECUMN_2951	ECUMN_3525	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	Putative protein-disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT.	0.489
CAR14122.1	ydbA	ECUMN_2951	ECUMN_1651	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	Putative autotransported outer membrane protein involved in cell adhesion; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.	0.687
CAR14122.1	yjhR	ECUMN_2951	ECUMN_4911	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	Fragment of Putative superfamily I DNA helicase (part 1); Gene remnant; putative enzyme.	0.516
CAR14133.1	CAR14006.1	ECUMN_2962	ECUMN_2829	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	Putative intimin ((attaching and effacing protein) or invasin protein (sivH-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.766
CAR14133.1	CAR14122.1	ECUMN_2962	ECUMN_2951	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	0.697
CAR14133.1	CAR14138.1	ECUMN_2962	ECUMN_2967	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.770
CAR14133.1	CAR14452.1	ECUMN_2962	ECUMN_3289	Conserved hypothetical protein from bacteriophage origin; Homologs of previously reported genes of unknown function; extrachromosomal origin.	Conserved hypothetical protein; Homologs of previously reported genes of unknown function.	0.644