13 items (Escherichia coli UMN026) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ybgI	Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (247 aa)
	minD	Membrane ATPase of the MinC-MinD-MinE system; Function experimentally demonstrated in the studied species; factor. (270 aa)
	minC	Cell division inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. (231 aa)
	pspA	Regulatory protein for phage-shock-protein operon; Function experimentally demonstrated in the studied species; regulator. (222 aa)
	ydeH	Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (296 aa)
	tar	Methyl-accepting chemotaxis protein II; Function experimentally demonstrated in the studied species; regulator. (553 aa)
	cheW	Purine-binding chemotaxis protein; Function experimentally demonstrated in the studied species; regulator. (167 aa)
	yeeX	Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0265 family. (131 aa)
	yqjD	Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (101 aa)
	rbbA	Fused ribosome-associated ATPase: ATP-binding protein; Function experimentally demonstrated in the studied species; enzyme. (911 aa)
	tnaA	tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Function experimentally demonstrated in the studied species; enzyme; Belongs to the beta-eliminating lyase family. (471 aa)
	yjbJ	Putative stress response protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the UPF0337 (CsbD) family. (69 aa)
	yjdO	Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (57 aa)

Your Current Organism:

Escherichia coli UMN026

NCBI taxonomy Id: 585056
Other names: E. coli UMN026

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cheW	tar	ECUMN_2184	ECUMN_2183	Purine-binding chemotaxis protein; Function experimentally demonstrated in the studied species; regulator.	Methyl-accepting chemotaxis protein II; Function experimentally demonstrated in the studied species; regulator.	0.999
minC	minD	ECUMN_1465	ECUMN_1464	Cell division inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.	Membrane ATPase of the MinC-MinD-MinE system; Function experimentally demonstrated in the studied species; factor.	0.999
minD	minC	ECUMN_1464	ECUMN_1465	Membrane ATPase of the MinC-MinD-MinE system; Function experimentally demonstrated in the studied species; factor.	Cell division inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.	0.999
tar	cheW	ECUMN_2183	ECUMN_2184	Methyl-accepting chemotaxis protein II; Function experimentally demonstrated in the studied species; regulator.	Purine-binding chemotaxis protein; Function experimentally demonstrated in the studied species; regulator.	0.999