STRINGSTRING
basR basR cadC cadC yjjQ yjjQ bglJ bglJ creB creB arcA arcA uhpA uhpA uvrY uvrY sdiA sdiA rcsA rcsA yedW yedW baeR baeR narP narP rcsB rcsB evgA evgA yqeH yqeH yqeI yqeI ygeH ygeH CAR14349.1 CAR14349.1 CAR14356.1 CAR14356.1 ompR ompR malT malT yhiF yhiF gadE gadE yhjB yhjB CAR15325.1 CAR15325.1 rstA rstA lafZ lafZ narL narL csgD csgD cusR cusR fimZ fimZ yahA yahA ykgK ykgK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
basRDNA-binding response regulator in two-component regulatory system with BasS; Function experimentally demonstrated in the studied species; regulator. (222 aa)
cadCDNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator. (512 aa)
yjjQPutative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (241 aa)
bglJDNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator. (207 aa)
creBDNA-binding response regulator in two-component regulatory system with CreC; Function experimentally demonstrated in the studied species; regulator. (229 aa)
arcADNA-binding response regulator in two-component regulatory system with ArcB or CpxA; Function experimentally demonstrated in the studied species; regulator. (238 aa)
uhpADNA-binding response regulator in two-component regulatory system wtih UhpB; Function experimentally demonstrated in the studied species; regulator. (196 aa)
uvrYDNA-binding response regulator in two-component regulatory system with BarA; Function experimentally demonstrated in the studied species; regulator. (218 aa)
sdiADNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator. (240 aa)
rcsADNA-binding transcriptional activator, co-regulator with RcsB; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes. (207 aa)
yedWDNA-binding response regulator in two-component system with YedV; Function experimentally demonstrated in the studied species; regulator. (223 aa)
baeRDNA-binding response regulator in two-component regulatory system with BaeS; Function experimentally demonstrated in the studied species; regulator. (240 aa)
narPDNA-binding response regulator in two-component regulatory system with NarQ or NarX; Function experimentally demonstrated in the studied species; regulator. (215 aa)
rcsBDNA-binding response regulator in two-component regulatory system with RcsC and YojN; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions. Can function both in an RcsA-dependent or RcsA-independent manner. (216 aa)
evgADNA-binding response regulator in two-component regulatory system with EvgS; Function experimentally demonstrated in the studied species; regulator. (204 aa)
yqeHConserved hypothetical protein; Homologs of previously reported genes of unknown function. (210 aa)
yqeIPutative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (269 aa)
ygeHPutative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (458 aa)
CAR14349.1Conserved hypothetical protein, putative Bacterial regulatory protein LuxR family; Homologs of previously reported genes of unknown function. (210 aa)
CAR14356.1HTH luxR-type domain-containing protein; Homologs of previously reported genes of unknown function. (166 aa)
ompRDNA-binding response regulator in two-component regulatory system with EnvZ; Function experimentally demonstrated in the studied species; regulator. (239 aa)
malTFused conserved hypothetical protein; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box. (901 aa)
yhiFPutative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (176 aa)
gadEDNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator. (175 aa)
yhjBPutative DNA-binding response regulator in two-component regulatory system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (200 aa)
CAR15325.1Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (565 aa)
rstADNA-binding response regulator in two-component regulatory system with RstB; Function experimentally demonstrated in the studied species; regulator. (242 aa)
lafZLateral flagellar transmembrane regulator; Function of strongly homologous gene; regulator. (297 aa)
narLDNA-binding response regulator in two-component regulatory system with NarX (or NarQ); Function experimentally demonstrated in the studied species; regulator. (216 aa)
csgDDNA-binding transcriptional activator in two-component regulatory system; Function experimentally demonstrated in the studied species; regulator. (216 aa)
cusRDNA-binding response regulator in two-component regulatory system with CusS; Function experimentally demonstrated in the studied species; regulator. (227 aa)
fimZDNA-binding transcriptional regulator, isolated component of a two-component regulator system; Function experimentally demonstrated in the studied species; regulator. (210 aa)
yahACyclic di-GMP phosphodiesterase; Function experimentally demonstrated in the studied species; enzyme. (362 aa)
ykgKPutative transcriptional regulator; Part of the ecpRABCDE operon, which encodes the E.coli common pilus (ECP). ECP is found in both commensal and pathogenic strains and plays a dual role in early-stage biofilm development and host cell recognition. Positively regulates the expression of the ecp operon (By similarity). (196 aa)
Your Current Organism:
Escherichia coli UMN026
NCBI taxonomy Id: 585056
Other names: E. coli UMN026
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.