STRINGSTRING
sgrR sgrR secM secM yacL yacL yacC yacC ybaE ybaE aroM aroM ybfA ybfA flhE flhE yobD yobD yniB yniB ynfD ynfD yceB yceB dinI dinI mdoC mdoC yccR yccR ycbJ ycbJ yfbU yfbU yfeY yfeY ypfG ypfG ypfN ypfN ygaC ygaC iap iap yijD yijD yiiR yiiR yggN yggN yhfK yhfK yhjJ yhjJ yiaF yiaF yidQ yidQ yidR yidR mdoB mdoB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sgrRDNA-binding transcriptional regulator; Activates the small RNA gene sgrS under glucose-phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding these molecules in its C-terminal solute-binding domain. (559 aa)
secMRegulator of secA translation; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. (170 aa)
yacLConserved hypothetical protein; Homologs of previously reported genes of unknown function; 7567469; Belongs to the UPF0231 family. (120 aa)
yacCConserved hypothetical protein; Homologs of previously reported genes of unknown function. (172 aa)
ybaEConserved hypothetical protein; Homologs of previously reported genes of unknown function. (566 aa)
aroMConserved hypothetical protein; Homologs of previously reported genes of unknown function; 3001025. (225 aa)
ybfAConserved hypothetical protein; Homologs of previously reported genes of unknown function. (68 aa)
flhEConserved hypothetical protein; Homologs of previously reported genes of unknown function; 1482109, 89181349. (130 aa)
yobDConserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (152 aa)
yniBConserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (178 aa)
ynfDConserved hypothetical protein; Homologs of previously reported genes of unknown function. (101 aa)
yceBPutative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; lipoprotein. (186 aa)
dinIDNA damage-inducible protein I; Function experimentally demonstrated in the studied species; factor. (125 aa)
mdoCMembrane protein required for modification of periplasmic glucan; Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane. (385 aa)
yccRConserved hypothetical protein; Homologs of previously reported genes of unknown function. (209 aa)
ycbJConserved hypothetical protein; Homologs of previously reported genes of unknown function. (297 aa)
yfbUConserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0304 family. (164 aa)
yfeYConserved hypothetical protein; Homologs of previously reported genes of unknown function; 7764507. (191 aa)
ypfGConserved hypothetical protein; Homologs of previously reported genes of unknown function. (347 aa)
ypfNConserved hypothetical protein; Homologs of previously reported genes of unknown function. (66 aa)
ygaCConserved hypothetical protein; Homologs of previously reported genes of unknown function. (114 aa)
iapAminopeptidase in alkaline phosphatase isozyme conversion; Function experimentally demonstrated in the studied species; enzyme. (345 aa)
yijDConserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (119 aa)
yiiRConserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (146 aa)
yggNConserved hypothetical protein; Homologs of previously reported genes of unknown function. (239 aa)
yhfKConserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (700 aa)
yhjJPutative zinc-dependent peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (498 aa)
yiaFConserved hypothetical protein; Homologs of previously reported genes of unknown function. (236 aa)
yidQConserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (110 aa)
yidRConserved hypothetical protein; Homologs of previously reported genes of unknown function. (404 aa)
mdoBFragment of putative oxidoreductase, Zn-dependent and NAD(P)-binding (partial); Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones; Belongs to the OpgB family. (763 aa)
Your Current Organism:
Escherichia coli IAI39
NCBI taxonomy Id: 585057
Other names: E. coli IAI39
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