STRINGSTRING
ybjE ybjE ECIAI39_0857 ECIAI39_0857 yccF yccF yccS yccS ycbZ ycbZ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ybjEPutative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (299 aa)
ECIAI39_0857Fragment of conserved hypothetical protein (partial); Gene remnant. (341 aa)
yccFConserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (148 aa)
yccSConserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (717 aa)
ycbZPutative ATP-dependent protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (586 aa)
Your Current Organism:
Escherichia coli IAI39
NCBI taxonomy Id: 585057
Other names: E. coli IAI39
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