STRINGSTRING
rpoH rpoH rob rob creA creA creB creB creC creC creD creD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpoHRNA polymerase, sigma 32 (sigma H) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. (284 aa)
robDNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator. (289 aa)
creAConserved hypothetical protein; Homologs of previously reported genes of unknown function; 8449900. (157 aa)
creBDNA-binding response regulator in two-component regulatory system with CreC; Function experimentally demonstrated in the studied species; regulator. (229 aa)
creCTwo-component system, OmpR family, sensor histidine kinase CreC; Function experimentally demonstrated in the studied species; regulator. (474 aa)
creDInner membrane protein; Function experimentally demonstrated in the studied species; membrane component. (450 aa)
Your Current Organism:
Escherichia coli IAI39
NCBI taxonomy Id: 585057
Other names: E. coli IAI39
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