STRINGSTRING
yegP yegP ydiZ ydiZ osmC osmC msyB msyB ycaC ycaC ygaU ygaU yiaG yiaG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yegPConserved hypothetical protein; Homologs of previously reported genes of unknown function. (110 aa)
ydiZConserved hypothetical protein; Homologs of previously reported genes of unknown function. (96 aa)
osmCOsmotically inducible, stress-inducible membrane protein; Function experimentally demonstrated in the studied species; membrane component. (143 aa)
msyBConserved hypothetical protein; Homologs of previously reported genes of unknown function. (124 aa)
ycaCPutative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (208 aa)
ygaUConserved hypothetical protein; Homologs of previously reported genes of unknown function. (149 aa)
yiaGPutative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (96 aa)
Your Current Organism:
Escherichia coli IAI39
NCBI taxonomy Id: 585057
Other names: E. coli IAI39
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