(6 nodes) Slime layer organization network (Escherichia coli IAI39)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	wcaA	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (279 aa)
	wcaB	Putative acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the transferase hexapeptide repeat family. (162 aa)
	wcaC	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (405 aa)
	wcaD	Putative colanic acid polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (405 aa)
	wcaE	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (248 aa)
	wcaF	Putative glycose-acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (182 aa)

Your Current Organism:

Escherichia coli IAI39

NCBI taxonomy Id: 585057
Other names: E. coli IAI39

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
wcaA	wcaB	ECIAI39_0956	ECIAI39_0957	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the transferase hexapeptide repeat family.	0.947
wcaA	wcaC	ECIAI39_0956	ECIAI39_0958	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.988
wcaA	wcaD	ECIAI39_0956	ECIAI39_0959	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative colanic acid polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.919
wcaA	wcaE	ECIAI39_0956	ECIAI39_0960	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.975
wcaA	wcaF	ECIAI39_0956	ECIAI39_0961	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative glycose-acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.918
wcaB	wcaA	ECIAI39_0957	ECIAI39_0956	Putative acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the transferase hexapeptide repeat family.	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.947
wcaB	wcaC	ECIAI39_0957	ECIAI39_0958	Putative acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the transferase hexapeptide repeat family.	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.970
wcaB	wcaD	ECIAI39_0957	ECIAI39_0959	Putative acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the transferase hexapeptide repeat family.	Putative colanic acid polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.896
wcaB	wcaE	ECIAI39_0957	ECIAI39_0960	Putative acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the transferase hexapeptide repeat family.	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.943
wcaB	wcaF	ECIAI39_0957	ECIAI39_0961	Putative acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the transferase hexapeptide repeat family.	Putative glycose-acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.964
wcaC	wcaA	ECIAI39_0958	ECIAI39_0956	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.988
wcaC	wcaB	ECIAI39_0958	ECIAI39_0957	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the transferase hexapeptide repeat family.	0.970
wcaC	wcaD	ECIAI39_0958	ECIAI39_0959	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative colanic acid polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.902
wcaC	wcaE	ECIAI39_0958	ECIAI39_0960	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.987
wcaC	wcaF	ECIAI39_0958	ECIAI39_0961	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative glycose-acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.976
wcaD	wcaA	ECIAI39_0959	ECIAI39_0956	Putative colanic acid polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.919
wcaD	wcaB	ECIAI39_0959	ECIAI39_0957	Putative colanic acid polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the transferase hexapeptide repeat family.	0.896
wcaD	wcaC	ECIAI39_0959	ECIAI39_0958	Putative colanic acid polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.902
wcaD	wcaE	ECIAI39_0959	ECIAI39_0960	Putative colanic acid polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.993
wcaD	wcaF	ECIAI39_0959	ECIAI39_0961	Putative colanic acid polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative glycose-acyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.956