STRINGSTRING
ycjM ycjM ycjN ycjN ycjO ycjO ycjP ycjP ycjQ ycjQ ycjR ycjR ycjS ycjS ycjT ycjT ycjU ycjU ycjV ycjV ompG ompG ycjW ycjW
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ycjMPutative glucosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (559 aa)
ycjNPutative sugar transporter subunit: periplasmic-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (430 aa)
ycjOPutative sugar transporter subunit: permease component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (293 aa)
ycjPPutative sugar transporter subunit: permease component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (280 aa)
ycjQPutative oxidoreductase, Zn-dependent and NAD(P)-binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (350 aa)
ycjRPutative isomerase/epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (262 aa)
ycjSPutative oxidoreductase, NADH-binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (351 aa)
ycjTPutative glycosyl hydrolase/phosphorylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (755 aa)
ycjUPutative glucose-1-phosphate phosphodismutase, beta-phosphoglucomutase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (219 aa)
ycjVPutative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily. (360 aa)
ompGOuter membrane porin; Function experimentally demonstrated in the studied species; transporter. (301 aa)
ycjWPutative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (332 aa)
Your Current Organism:
Escherichia coli IAI39
NCBI taxonomy Id: 585057
Other names: E. coli IAI39
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