STRINGSTRING
yadG yadG yadH yadH yadI yadI yadE yadE gltL gltL gltK gltK gltJ gltJ gltI gltI ybhR ybhR ybhS ybhS ybhF ybhF ybhG ybhG ybiH ybiH CAR16911.1 CAR16911.1 CAR16912.1 CAR16912.1 glnQ glnQ glnP glnP glnH glnH yliA yliA yliB yliB yliC yliC yliD yliD artJ artJ artM artM artQ artQ artI artI artP artP fliY fliY yecS yecS yecC yecC CAR17709.1 CAR17709.1 oppA oppA oppB oppB oppC oppC oppD oppD oppF oppF sapF sapF sapD sapD sapC sapC sapB sapB sapA sapA mppA mppA ddpF ddpF ddpD ddpD ddpC ddpC ddpB ddpB ddpA ddpA ddpX ddpX yejA yejA yejB yejB yejE yejE yejF yejF hisP hisP hisM hisM hisQ hisQ hisJ hisJ argT argT ygiS ygiS aapJ aapJ aapQ aapQ aapM aapM aapP aapP nikA nikA nikB nikB nikC nikC nikD nikD nikE nikE nikR nikR yhhJ yhhJ rbbA rbbA yhiI yhiI yhiJ yhiJ insG-10 insG-10 dppF dppF dppD dppD dppC dppC dppB dppB dppA dppA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yadGPutative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (308 aa)
yadHPutative transporter subunit: membrane component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (256 aa)
yadIPutative PTS Enzyme IIA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (146 aa)
yadEPutative exported polysaccharide deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (409 aa)
gltLGlutamate and aspartate transporter subunit; Function experimentally demonstrated in the studied species; transporter. (241 aa)
gltKGlutamate and aspartate transporter subunit; Function experimentally demonstrated in the studied species; transporter. (224 aa)
gltJGlutamate and aspartate transporter subunit; Function experimentally demonstrated in the studied species; transporter. (246 aa)
gltIGlutamate and aspartate transporter subunit; Function experimentally demonstrated in the studied species; transporter. (302 aa)
ybhRPutative transporter subunit: permease component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (368 aa)
ybhSPutative transporter subunit: permease component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (377 aa)
ybhFPutative transporter fused subunits of ABC superfamily: ATP-binding components; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (578 aa)
ybhGPutative membrane fusion protein (MFP) component of efflux pump, membrane anchor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (332 aa)
ybiHPutative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (223 aa)
CAR16911.1Hypothetical protein. (47 aa)
CAR16912.1Putative toxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (670 aa)
glnQGlutamine transporter subunit; Function experimentally demonstrated in the studied species; transporter. (240 aa)
glnPGlutamine transporter subunit; Function experimentally demonstrated in the studied species; transporter. (219 aa)
glnHGlutamine transporter subunit; Function experimentally demonstrated in the studied species; transporter; Belongs to the bacterial solute-binding protein 3 family. (248 aa)
yliAPutative peptide transport fused subunits of ABC superfamily: ATP-binding components; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily. (612 aa)
yliBPutative peptide transporter subunit: periplasmic-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (512 aa)
yliCPutative peptide transporter permease subunit: membrane component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (306 aa)
yliDPutative peptide transporter permease subunit: membrane component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (303 aa)
artJArginine transporter subunit; Function experimentally demonstrated in the studied species; transporter; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
artMArginine transporter subunit; Function experimentally demonstrated in the studied species; transporter. (222 aa)
artQArginine transporter subunit; Function experimentally demonstrated in the studied species; transporter. (238 aa)
artIArginine transporter subunit; Function experimentally demonstrated in the studied species; transporter; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
artPArginine transporter subunit; Function experimentally demonstrated in the studied species; transporter. (242 aa)
fliYCystine transporter subunit; Function experimentally demonstrated in the studied species; transporter; Belongs to the bacterial solute-binding protein 3 family. (266 aa)
yecSPutative transporter subunit: permease component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (222 aa)
yecCPutative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (250 aa)
CAR17709.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (104 aa)
oppAOligopeptide transporter subunit; Function experimentally demonstrated in the studied species; transporter. (543 aa)
oppBOligopeptide transporter subunit; Function experimentally demonstrated in the studied species; transporter. (306 aa)
oppCOligopeptide transporter subunit; Function experimentally demonstrated in the studied species; transporter. (302 aa)
oppDOligopeptide transporter subunit; Function experimentally demonstrated in the studied species; transporter; Belongs to the ABC transporter superfamily. (337 aa)
oppFOligopeptide transporter subunit; Function experimentally demonstrated in the studied species; transporter; Belongs to the ABC transporter superfamily. (334 aa)
sapFAntimicrobial peptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (268 aa)
sapDAntimicrobial peptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily. (330 aa)
sapCAntimicrobial peptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (296 aa)
sapBAntimicrobial peptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (321 aa)
sapAAntimicrobial peptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (547 aa)
mppAMurein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit; Function experimentally demonstrated in the studied species; transporter. (537 aa)
ddpFD-ala-D-ala transporter subunit; Function experimentally demonstrated in the studied species; transporter; Belongs to the ABC transporter superfamily. (308 aa)
ddpDD-ala-D-ala transporter subunit; Function experimentally demonstrated in the studied species; transporter; Belongs to the ABC transporter superfamily. (328 aa)
ddpCD-ala-D-ala transporter subunit; Function experimentally demonstrated in the studied species; transporter. (298 aa)
ddpBD-ala-D-ala transporter subunit; Function experimentally demonstrated in the studied species; transporter. (340 aa)
ddpAD-ala-D-a la transporter subunit; Function experimentally demonstrated in the studied species; transporter. (516 aa)
ddpXD-ala-D-ala dipeptidase, Zn-dependent; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. (193 aa)
yejAPutative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (604 aa)
yejBPutative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (364 aa)
yejEPutative oligopeptide transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (341 aa)
yejFPutative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily. (529 aa)
hisPHistidine/lysine/arginine/ornithine transporter subunit; Function experimentally demonstrated in the studied species; transporter. (257 aa)
hisMHistidine/lysine/arginine/ornithine transporter subunit; Function experimentally demonstrated in the studied species; transporter. (238 aa)
hisQHistidine/lysine/arginine/ornithine transporter subunit; Function experimentally demonstrated in the studied species; transporter. (228 aa)
hisJHistidine/lysine/arginine/ornithine transporter subunit; Function experimentally demonstrated in the studied species; transporter; Belongs to the bacterial solute-binding protein 3 family. (260 aa)
argTLysine/arginine/ornithine transporter subunit; Function experimentally demonstrated in the studied species; transporter; Belongs to the bacterial solute-binding protein 3 family. (260 aa)
ygiSTransporter subunit: periplasmic-binding component of ABC superfamily; Function of strongly homologous gene; transporter. (535 aa)
aapJAmino-acid transporter subunit; Function of strongly homologous gene; transporter; Belongs to the bacterial solute-binding protein 3 family. (305 aa)
aapQAmino-acid transporter subunit; Function of strongly homologous gene; transporter. (393 aa)
aapMAmino-acid transporter subunit; Function of strongly homologous gene; transporter. (367 aa)
aapPAmino-acid transporter subunit; Function of strongly homologous gene; transporter. (252 aa)
nikANickel transporter subunit; Function experimentally demonstrated in the studied species; transporter. (524 aa)
nikBNickel transporter subunit; Function experimentally demonstrated in the studied species; transporter. (314 aa)
nikCNickel transporter subunit; Function experimentally demonstrated in the studied species; transporter. (277 aa)
nikDNickel transporter subunit; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. (254 aa)
nikENickel transporter subunit; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. (268 aa)
nikRDNA-binding transcriptional repressor, Ni-binding; Transcriptional repressor of the nikABCDE operon. Is active in the presence of excessive concentrations of intracellular nickel. (133 aa)
yhhJPutative transporter subunit: membrane component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (374 aa)
rbbAFused ribosome-associated ATPase: ATP-binding protein; Function experimentally demonstrated in the studied species; enzyme. (911 aa)
yhiIPutative HlyD family secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (355 aa)
yhiJConserved hypothetical protein; Homologs of previously reported genes of unknown function. (540 aa)
insG-10Putative IS4 transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (448 aa)
dppFDipeptide transporter; Function experimentally demonstrated in the studied species; transporter; Belongs to the ABC transporter superfamily. (334 aa)
dppDDipeptide transporter; Function experimentally demonstrated in the studied species; transporter; Belongs to the ABC transporter superfamily. (327 aa)
dppCDipeptide transporter; Function experimentally demonstrated in the studied species; transporter. (300 aa)
dppBDipeptide transporter; Function experimentally demonstrated in the studied species; transporter. (339 aa)
dppADipeptide transporter; Function experimentally demonstrated in the studied species; transporter. (535 aa)
Your Current Organism:
Escherichia coli IAI39
NCBI taxonomy Id: 585057
Other names: E. coli IAI39
Server load: low (18%) [HD]