STRINGSTRING
yfcS yfcS CAR16163.1 CAR16163.1 ecpD ecpD sfmC sfmC yehC yehC ycbF ycbF ycbR ycbR yqiH yqiH lfpB lfpB papD papD fimC fimC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yfcSPutative periplasmic pilus exported chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (250 aa)
CAR16163.1Putative membrane-associated pilin chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (227 aa)
ecpDPeriplasmic pilin chaperone; Function of strongly homologous gene; factor. (246 aa)
sfmCPilin chaperone, periplasmic; Function experimentally demonstrated in the studied species; factor. (230 aa)
yehCPutative membrane-associated pilin chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (224 aa)
ycbFPutative periplasmic pilin chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (236 aa)
ycbRPutative periplasmic pilin chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (233 aa)
yqiHFragment of outer membrane usher protein (part 2); Gene remnant; factor. (249 aa)
lfpBPutative fimbrial chaperone protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (243 aa)
papDChaperone protein PapD precursor; Function experimentally demonstrated in the studied species; factor. (244 aa)
fimCChaperone, periplasmic; Function experimentally demonstrated in the studied species; factor. (241 aa)
Your Current Organism:
Escherichia coli IAI39
NCBI taxonomy Id: 585057
Other names: E. coli IAI39
Server load: low (28%) [HD]