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| | nhaR | DNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (301 aa) |
| | leuO | DNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (314 aa) |
| | pdhR | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator. (254 aa) |
| | ybaO | Putative DNA-binding transcriptional regulator with homology to Lrp; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (152 aa) |
| | mhpR | DNA-binding transcriptional activator, 3HPP-binding; Function experimentally demonstrated in the studied species; regulator. (281 aa) |
| | cynR | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (299 aa) |
| | yahB | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (310 aa) |
| | CAR16530.1 | Putative transcriptional regulator, lysR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (324 aa) |
| | CAR16531.1 | Putative LysR-like transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (339 aa) |
| | yafC | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (304 aa) |
| | CAR16647.1 | Putative DNA primase from prophage (possibly fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (545 aa) |
| | ybdO | Putative DNA-binding transcriptional regulator, LysR-type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (312 aa) |
| | ybeF | Putative DNA-binding transcriptional regulator, LysR-type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (317 aa) |
| | nagC | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine; Function experimentally demonstrated in the studied species; regulator. (406 aa) |
| | fur | DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport; Function experimentally demonstrated in the studied species; regulator; Belongs to the Fur family. (148 aa) |
| | CAR16805.1 | Putative GntR family regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (237 aa) |
| | CAR16832.1 | Putative LysR-like transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (301 aa) |
| | modE | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator. (262 aa) |
| | ybhD | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (338 aa) |
| | mntR | DNA-binding transcriptional regulator of mntH; Function experimentally demonstrated in the studied species; regulator. (155 aa) |
| | yegW | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (248 aa) |
| | gatR | Galactitol utilization operon repressor; Function experimentally demonstrated in the studied species; regulator. (259 aa) |
| | yeeY | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (309 aa) |
| | rbsK-2 | Putative carbohydrate kinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (404 aa) |
| | nac | DNA-binding transcriptional dual regulator of nitrogen assimilation; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (305 aa) |
| | cbl | DNA-binding transcriptional activator of cysteine biosynthesis; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (316 aa) |
| | ruvB | ATP-dependent DNA helicase, component of RuvABC resolvasome; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (336 aa) |
| | kdgR | DNA-binding transcriptional repressor KdgR; Function experimentally demonstrated in the studied species; regulator. (263 aa) |
| | yeaT | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (307 aa) |
| | ydjF | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (252 aa) |
| | ydhB | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (310 aa) |
| | slyA | DNA-binding transcriptional activator; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family. (144 aa) |
| | ynfL | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (297 aa) |
| | dgsA | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (406 aa) |
| | cysB | DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (324 aa) |
| | deoT | DNA-binding transcriptional repressor, DeoR family; Function experimentally demonstrated in the studied species; regulator. (249 aa) |
| | fnr | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth; Function experimentally demonstrated in the studied species; regulator. (250 aa) |
| | abgR | DNA-binding transcriptional regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (302 aa) |
| | marR | DNA-binding transcriptional repressor of multiple antibiotic resistance; Function experimentally demonstrated in the studied species; regulator. (144 aa) |
| | CAR17965.1 | Putative DNA-binding transcriptional regulator HTH family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (232 aa) |
| | ydfH | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (228 aa) |
| | fadR | DNA-binding transcriptional dual regulator of fatty acid metabolism; Multifunctional regulator of fatty acid metabolism. (239 aa) |
| | CAR18069.1 | Putative phage-related DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (102 aa) |
| | CAR18149.1 | Nucleic acid independent nucleoside triphosphatase; Function of strongly homologous gene; extrachromosomal origin. (582 aa) |
| | yceH | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; 2828880; Belongs to the UPF0502 family. (215 aa) |
| | mukF | Involved in chromosome partioning, Ca2+ binding protein; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. (440 aa) |
| | ycaN | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (302 aa) |
| | ftsK | DNA-binding membrane protein required for chromosome resolution and partitioning; Function experimentally demonstrated in the studied species; cell process. (1368 aa) |
| | lrp | DNA-binding transcriptional dual regulator, leucine-binding; Function experimentally demonstrated in the studied species; regulator. (164 aa) |
| | yeiE | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (293 aa) |
| | yeiI | Putative kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (362 aa) |
| | CAR18498.1 | Transcriptional regulator, GntR family. (232 aa) |
| | CAR18507.1 | Conserved hypothetical protein, putative transcriptional regulator; Homologs of previously reported genes of unknown function; Belongs to the LysR transcriptional regulatory family. (299 aa) |
| | yfaX | Fragment of putative epimerase/enolase/dehydratase (part 1); Gene remnant; putative enzyme. (260 aa) |
| | lrhA | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (312 aa) |
| | dsdC | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (317 aa) |
| | xapR | HTH-type transcriptional regulator (Xanthosine operon regulatory protein); Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the LysR transcriptional regulatory family. (294 aa) |
| | yffI | Putative ethanolaminosome structural protein with putative role in ethanolamine utilization; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (166 aa) |
| | iscR | DNA-binding transcriptional repressor; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins. (162 aa) |
| | hcaR | DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (296 aa) |
| | yphH | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (397 aa) |
| | csiR | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator. (220 aa) |
| | ygaV | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (99 aa) |
| | CAR18983.1 | Putative fused protein: aminotransaminase/transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (444 aa) |
| | mprA | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; Function experimentally demonstrated in the studied species; regulator. (176 aa) |
| | srlR | DNA-bindng transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (257 aa) |
| | CAR19048.1 | Transcriptional regulator hosA; Function experimentally demonstrated in the studied species; regulator. (135 aa) |
| | ilvY | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (324 aa) |
| | hdfR | DNA-binding transcriptional regulator; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon. (279 aa) |
| | oxyR | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (305 aa) |
| | frvR | Putative regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (582 aa) |
| | yihW | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (261 aa) |
| | yihL | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (236 aa) |
| | CAR19283.1 | Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (284 aa) |
| | CAR19298.1 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (91 aa) |
| | metR | DNA-binding transcriptional activator, homocysteine-binding; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (317 aa) |
| | fucR | DNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator. (243 aa) |
| | gcvA | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (305 aa) |
| | lysR | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (311 aa) |
| | argP | DNA-binding transcriptional activator, replication initiation inhibitor; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. (297 aa) |
| | ygfI | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (298 aa) |
| | CAR19512.1 | Putative HTH-type transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (183 aa) |
| | papI | Pap operon regulatory protein PapB (partial); Function of strongly homologous gene; regulator. (77 aa) |
| | glcC | DNA-binding transcriptional dual regulator, glycolate-binding; Function experimentally demonstrated in the studied species; regulator. (254 aa) |
| | ygiP | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (310 aa) |
| | yqjI | Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (207 aa) |
| | exuR | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (258 aa) |
| | yhaJ | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (298 aa) |
| | tdcA | DNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (312 aa) |
| | agaR | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator. (269 aa) |
| | nanR | DNA-binding transcriptional dual regulator; Transcriptional repressor that controls expression of the genes required for the catabolism of sialic acids. (263 aa) |
| | argR | DNA-binding transcriptional dual regulator, L-arginine-binding; Regulates arginine biosynthesis genes. (156 aa) |
| | aaeR | DNA-binding transcriptional regulator, efflux system; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (309 aa) |
| | CAR19870.1 | Putative DEOR-type transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (276 aa) |
| | crp | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator. (210 aa) |
| | yhgG | Putative DNA-binding transcriptional regulator; May function as a transcriptional regulator that controls feoABC expression. (78 aa) |
| | glpR | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (252 aa) |
| | CAR20075.1 | Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (251 aa) |
| | arsR | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (117 aa) |
| | CAR20107.1 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (106 aa) |
| | yhjC | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (323 aa) |
| | yiaJ | DNA-binding transcriptional repressor; Function of homologous gene experimentally demonstrated in an other organism; regulator. (282 aa) |
| | yiaU | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (324 aa) |
| | selB | selenocysteinyl-tRNA-specific translation factor; Function experimentally demonstrated in the studied species; factor. (614 aa) |
| | lldR | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (258 aa) |
| | CAR20292.1 | Putative PTS system transcriptional antiterminator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (517 aa) |
| | dsdC-2 | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator; Belongs to the LysR transcriptional regulatory family. (316 aa) |
| | CAR20333.1 | Putative carbohydrate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (364 aa) |
| | yidP | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (238 aa) |
| | dgoR | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (229 aa) |
| | yidZ | Putative DNA-binding transcriptional regulator; Involved in anaerobic NO protection. (319 aa) |
| | asnC | DNA-binding transcriptional dual regulator; Function experimentally demonstrated in the studied species; regulator. (152 aa) |
| | yieP | Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (230 aa) |
| | birA | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. (321 aa) |
| | rbsK-3 | Putative carbohydrate kinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (405 aa) |
| | iclR | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (274 aa) |
| | lexA | DNA-binding transcriptional repressor of SOS regulon; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (202 aa) |
| | zur | DNA-binding transcriptional repressor, Zn(II)-binding; Function experimentally demonstrated in the studied species; regulator; Belongs to the Fur family. (171 aa) |
| | phnF | Putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (241 aa) |
| | papI-2 | Pap operon regulatory protein PapI; Function experimentally demonstrated in the studied species; regulator. (77 aa) |
| | nsrR | DNA-binding transcriptional regulator; Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity. (141 aa) |
| | ulaR | DNA-binding transcriptional dual regulator; Represses ulaG and the ulaABCDEF operon. (251 aa) |
| | ytfH | Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (126 aa) |
| | argR-2 | Putative arginine repressor; Regulates arginine biosynthesis genes. (184 aa) |
| | uxuR | DNA-binding transcriptional repressor; Function experimentally demonstrated in the studied species; regulator. (257 aa) |
| | yjiE | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (303 aa) |
| | yjjM | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (301 aa) |
| | CAR20958.1 | Putative replication protein from phage; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (272 aa) |
| | CAR20960.1 | Putative LexA repressor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (108 aa) |
