(12 nodes) Mostly uncharacterized, incl. RimK-like ATP-grasp domain, and Response regulator receiver domain network (Synechococcus sp. KORDI49)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AII45097.1	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (215 aa)
	AII45098.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (235 aa)
	rimK	30S ribosomal protein S6 modification protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the RimK family. (466 aa)
	AII45100.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (40 aa)
	AII46008.1	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (250 aa)
	AII46010.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (250 aa)
	AII46011.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (231 aa)
	AII46075.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (145 aa)
	AII46206.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (178 aa)
	AII46207.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the P-Pant transferase superfamily. (210 aa)
	AII46208.1	Bacterioferritin comigratory protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (161 aa)
	AII47362.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (436 aa)

Your Current Organism:

Synechococcus sp. KORDI49

NCBI taxonomy Id: 585423
Other names: S. sp. KORDI-49, Synechococcus sp. KORDI-49

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AII45097.1	AII45098.1	KR49_01280	KR49_01285	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.651
AII45097.1	AII46008.1	KR49_01280	KR49_06020	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.677
AII45097.1	AII46207.1	KR49_01280	KR49_07050	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the P-Pant transferase superfamily.	0.710
AII45097.1	rimK	KR49_01280	KR49_01290	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	30S ribosomal protein S6 modification protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the RimK family.	0.477
AII45098.1	AII45097.1	KR49_01285	KR49_01280	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.651
AII45098.1	rimK	KR49_01285	KR49_01290	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	30S ribosomal protein S6 modification protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the RimK family.	0.558
AII45100.1	rimK	KR49_01295	KR49_01290	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	30S ribosomal protein S6 modification protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the RimK family.	0.401
AII46008.1	AII45097.1	KR49_06020	KR49_01280	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.677
AII46008.1	AII46010.1	KR49_06020	KR49_06030	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.453
AII46008.1	AII46011.1	KR49_06020	KR49_06035	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.439
AII46008.1	AII46075.1	KR49_06020	KR49_06370	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.587
AII46008.1	AII46207.1	KR49_06020	KR49_07050	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the P-Pant transferase superfamily.	0.582
AII46010.1	AII46008.1	KR49_06030	KR49_06020	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.453
AII46010.1	AII46011.1	KR49_06030	KR49_06035	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.773
AII46011.1	AII46008.1	KR49_06035	KR49_06020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.439
AII46011.1	AII46010.1	KR49_06035	KR49_06030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.773
AII46075.1	AII46008.1	KR49_06370	KR49_06020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.587
AII46206.1	AII46207.1	KR49_07045	KR49_07050	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the P-Pant transferase superfamily.	0.441
AII46207.1	AII45097.1	KR49_07050	KR49_01280	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the P-Pant transferase superfamily.	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.710
AII46207.1	AII46008.1	KR49_07050	KR49_06020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the P-Pant transferase superfamily.	SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.582