STRINGSTRING
AII45174.1 AII45174.1 AII45175.1 AII45175.1 AII45523.1 AII45523.1 AII45524.1 AII45524.1 AII45525.1 AII45525.1 AII45526.1 AII45526.1 AII45528.1 AII45528.1 AII45529.1 AII45529.1 rlpA rlpA AII45578.1 AII45578.1 AII45685.1 AII45685.1 ompR ompR AII45687.1 AII45687.1 sasA sasA AII46002.1 AII46002.1 AII46285.1 AII46285.1 AII46291.1 AII46291.1 AII46336.1 AII46336.1 AII46576.1 AII46576.1 AII46578.1 AII46578.1 AII46685.1 AII46685.1 AII46804.1 AII46804.1 AII46806.1 AII46806.1 AII47122.1 AII47122.1 AII47123.1 AII47123.1 AII47328.1 AII47328.1 AII47329.1 AII47329.1 AII47335.1 AII47335.1 AII47475.1 AII47475.1 AII47476.1 AII47476.1 AII47478.1 AII47478.1 AII47479.1 AII47479.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AII45174.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (237 aa)
AII45175.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (87 aa)
AII45523.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (310 aa)
AII45524.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pseudouridine synthase RsuA family. (248 aa)
AII45525.1ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (380 aa)
AII45526.1Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (238 aa)
AII45528.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (549 aa)
AII45529.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (475 aa)
rlpAHypothetical protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (119 aa)
AII45578.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (255 aa)
AII45685.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (124 aa)
ompRTranscriptional regulator; Part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (241 aa)
AII45687.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (463 aa)
sasAATPase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. (383 aa)
AII46002.1Histidine kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (683 aa)
AII46285.1Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (280 aa)
AII46291.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (248 aa)
AII46336.1Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (243 aa)
AII46576.1tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (334 aa)
AII46578.1Flavoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (401 aa)
AII46685.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (255 aa)
AII46804.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (379 aa)
AII46806.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (186 aa)
AII47122.1PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (242 aa)
AII47123.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (125 aa)
AII47328.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (426 aa)
AII47329.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (240 aa)
AII47335.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (508 aa)
AII47475.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (322 aa)
AII47476.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (676 aa)
AII47478.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (226 aa)
AII47479.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (134 aa)
Your Current Organism:
Synechococcus sp. KORDI49
NCBI taxonomy Id: 585423
Other names: S. sp. KORDI-49, Synechococcus sp. KORDI-49
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