10 items (Synechococcus sp. KORDI49) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AII45708.1	Peptidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (266 aa)
	AII46379.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (232 aa)
	AII46380.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (226 aa)
	AII46381.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (310 aa)
	rnhA	RNaseH ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (240 aa)
	AII46579.1	Pilus biosynthesis protein PilC; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (416 aa)
	AII46580.1	Twitching motility protein pilT; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (358 aa)
	AII46581.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (608 aa)
	AII47166.1	Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (379 aa)
	AII47327.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (150 aa)

Your Current Organism:

Synechococcus sp. KORDI49

NCBI taxonomy Id: 585423
Other names: S. sp. KORDI-49, Synechococcus sp. KORDI-49

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AII45708.1	AII46579.1	KR49_04455	KR49_09000	Peptidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Pilus biosynthesis protein PilC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.900
AII45708.1	AII46580.1	KR49_04455	KR49_09005	Peptidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Twitching motility protein pilT; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.815
AII45708.1	AII46581.1	KR49_04455	KR49_09010	Peptidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.887
AII45708.1	AII47166.1	KR49_04455	KR49_12265	Peptidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.809
AII45708.1	AII47327.1	KR49_04455	KR49_13090	Peptidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.839
AII46379.1	AII46380.1	KR49_07950	KR49_07955	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.773
AII46379.1	AII46381.1	KR49_07950	KR49_07960	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.773
AII46379.1	rnhA	KR49_07950	KR49_07970	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	RNaseH ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.610
AII46380.1	AII46379.1	KR49_07955	KR49_07950	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.773
AII46380.1	AII46381.1	KR49_07955	KR49_07960	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.786
AII46380.1	rnhA	KR49_07955	KR49_07970	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	RNaseH ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.615
AII46381.1	AII46379.1	KR49_07960	KR49_07950	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.773
AII46381.1	AII46380.1	KR49_07960	KR49_07955	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.786
AII46381.1	AII46579.1	KR49_07960	KR49_09000	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Pilus biosynthesis protein PilC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.700
AII46381.1	AII46581.1	KR49_07960	KR49_09010	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.700
AII46381.1	rnhA	KR49_07960	KR49_07970	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	RNaseH ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.615
AII46579.1	AII45708.1	KR49_09000	KR49_04455	Pilus biosynthesis protein PilC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.900
AII46579.1	AII46381.1	KR49_09000	KR49_07960	Pilus biosynthesis protein PilC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.700
AII46579.1	AII46580.1	KR49_09000	KR49_09005	Pilus biosynthesis protein PilC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Twitching motility protein pilT; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.978
AII46579.1	AII46581.1	KR49_09000	KR49_09010	Pilus biosynthesis protein PilC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999