STRINGSTRING
AII44900.1 AII44900.1 AII47439.1 AII47439.1 AII47336.1 AII47336.1 AII47118.1 AII47118.1 AII46961.1 AII46961.1 secY secY rpoA rpoA AII46893.1 AII46893.1 tuf tuf AII46780.1 AII46780.1 AII46774.1 AII46774.1 secA secA AII44812.1 AII44812.1 AII46530.1 AII46530.1 AII46453.1 AII46453.1 ndk ndk secE secE AII46355.1 AII46355.1 AII46250.1 AII46250.1 AII46244.1 AII46244.1 AII46208.1 AII46208.1 AII46035.1 AII46035.1 rpoZ rpoZ msrA-2 msrA-2 rpoB rpoB rpoC1 rpoC1 rpoC2 rpoC2 AII45860.1 AII45860.1 AII45853.1 AII45853.1 AII45817.1 AII45817.1 AII45815.1 AII45815.1 AII45814.1 AII45814.1 AII45794.1 AII45794.1 AII45693.1 AII45693.1 AII45670.1 AII45670.1 AII45657.1 AII45657.1 AII45623.1 AII45623.1 AII45567.1 AII45567.1 AII45556.1 AII45556.1 AII45471.1 AII45471.1 AII44787.1 AII44787.1 msrA msrA AII45463.1 AII45463.1 secD secD secF secF AII45290.1 AII45290.1 AII45219.1 AII45219.1 AII45212.1 AII45212.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AII44900.1Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (592 aa)
AII47439.1Peptidyl-prolyl cis-trans isomerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (202 aa)
AII47336.1Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (273 aa)
AII47118.1Thioredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the thioredoxin family. (108 aa)
AII46961.1Phosphotyrosine protein phosphatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (159 aa)
secYPreprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (439 aa)
rpoADNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (312 aa)
AII46893.1Hypothetical protein; Iron-storage protein. (194 aa)
tufElongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (399 aa)
AII46780.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (212 aa)
AII46774.1Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (307 aa)
secAPreprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (936 aa)
AII44812.1Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PstS family. (336 aa)
AII46530.1MFS transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (413 aa)
AII46453.1Inactivated Zn-dependent hydrolase of the beta-lactamase fold family; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (244 aa)
ndkNucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (151 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (79 aa)
AII46355.1Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (244 aa)
AII46250.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (210 aa)
AII46244.1MFS transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (409 aa)
AII46208.1Bacterioferritin comigratory protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (161 aa)
AII46035.1Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (76 aa)
rpoZDNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (70 aa)
msrA-2Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (212 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1097 aa)
rpoC1DNA-directed RNA polymerase subunit gamma; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (634 aa)
rpoC2DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily. (1357 aa)
AII45860.1MFS transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (451 aa)
AII45853.1Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (444 aa)
AII45817.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (425 aa)
AII45815.1Peptide ABC transporter permease; Transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (339 aa)
AII45814.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (528 aa)
AII45794.1Thioredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the thioredoxin family. (107 aa)
AII45693.1MFS transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (417 aa)
AII45670.1Multidrug ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (581 aa)
AII45657.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (393 aa)
AII45623.1Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (330 aa)
AII45567.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (156 aa)
AII45556.1ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (583 aa)
AII45471.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (154 aa)
AII44787.1Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (242 aa)
AII45463.1Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (593 aa)
secDPreprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. (493 aa)
secFPreprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecF subfamily. (307 aa)
AII45290.1Peroxiredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (199 aa)
AII45219.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (186 aa)
AII45212.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (326 aa)
Your Current Organism:
Synechococcus sp. KORDI49
NCBI taxonomy Id: 585423
Other names: S. sp. KORDI-49, Synechococcus sp. KORDI-49
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.