15 items (Theileria annulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TA07860	Splicing factor (Hs SLU7 homologue), putative. (387 aa)
	TA04320	DEAD-box family helicase, putative. (1001 aa)
	TA05355	Uncharacterized protein. (1747 aa)
	TA03820	Uncharacterized protein. (338 aa)
	TA11970	G10 protein, putative. (148 aa)
	TA13035	Pre-mRNA splicing factor (PRP17 homologue), putative. (693 aa)
	TA13380	RNA processing protein (Crooked neck family), putative. (657 aa)
	TA13585	Chromatin-binding protein, putative. (470 aa)
	TA15100	Isy1-like splicing family, putative. (194 aa)
	TA15655	C3H1-type domain-containing protein. (238 aa)
	TA20005	Rna-processing protein, putative. (826 aa)
	TA20070	ATP-dependent RNA helicase-related protein, putative. (703 aa)
	TA21175	Rna-binding protein, putative. (84 aa)
	TA09605	Pre-mRNA splicing protein (Prp18 homologue), putative. (410 aa)
	TA09690	Cell-cycle-control protein (Translation regulation), putative. (594 aa)

Your Current Organism:

Theileria annulata

NCBI taxonomy Id: 5874
Other names: T. annulata

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TA03820	TA04320	Q4UCX8	Q4UC45	Uncharacterized protein.	DEAD-box family helicase, putative.	0.999
TA03820	TA05355	Q4UCX8	Q4UCT3	Uncharacterized protein.	Uncharacterized protein.	0.815
TA03820	TA07860	Q4UCX8	Q4U9Y2	Uncharacterized protein.	Splicing factor (Hs SLU7 homologue), putative.	0.869
TA03820	TA09605	Q4UCX8	Q4UJ31	Uncharacterized protein.	Pre-mRNA splicing protein (Prp18 homologue), putative.	0.932
TA03820	TA09690	Q4UCX8	Q4UJ48	Uncharacterized protein.	Cell-cycle-control protein (Translation regulation), putative.	0.997
TA03820	TA11970	Q4UCX8	Q4UDS3	Uncharacterized protein.	G10 protein, putative.	0.997
TA03820	TA13035	Q4UCX8	Q4UEB5	Uncharacterized protein.	Pre-mRNA splicing factor (PRP17 homologue), putative.	0.999
TA03820	TA13380	Q4UCX8	Q4UEH9	Uncharacterized protein.	RNA processing protein (Crooked neck family), putative.	0.994
TA03820	TA13585	Q4UCX8	Q4UEL5	Uncharacterized protein.	Chromatin-binding protein, putative.	0.992
TA03820	TA15100	Q4UCX8	Q4UFB6	Uncharacterized protein.	Isy1-like splicing family, putative.	0.987
TA03820	TA15655	Q4UCX8	Q4UFL8	Uncharacterized protein.	C3H1-type domain-containing protein.	0.902
TA03820	TA20005	Q4UCX8	Q4UG46	Uncharacterized protein.	Rna-processing protein, putative.	0.997
TA03820	TA20070	Q4UCX8	Q4UG59	Uncharacterized protein.	ATP-dependent RNA helicase-related protein, putative.	0.860
TA03820	TA21175	Q4UCX8	Q4UGS2	Uncharacterized protein.	Rna-binding protein, putative.	0.848
TA04320	TA03820	Q4UC45	Q4UCX8	DEAD-box family helicase, putative.	Uncharacterized protein.	0.999
TA04320	TA05355	Q4UC45	Q4UCT3	DEAD-box family helicase, putative.	Uncharacterized protein.	0.657
TA04320	TA07860	Q4UC45	Q4U9Y2	DEAD-box family helicase, putative.	Splicing factor (Hs SLU7 homologue), putative.	0.948
TA04320	TA09605	Q4UC45	Q4UJ31	DEAD-box family helicase, putative.	Pre-mRNA splicing protein (Prp18 homologue), putative.	0.940
TA04320	TA09690	Q4UC45	Q4UJ48	DEAD-box family helicase, putative.	Cell-cycle-control protein (Translation regulation), putative.	0.997
TA04320	TA11970	Q4UC45	Q4UDS3	DEAD-box family helicase, putative.	G10 protein, putative.	0.997