(58 nodes) Mixed, incl. mRNA 3-end processing, and Nuclear transport network (Theileria annulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TA09810	Theileria-specific sub-telomeric protein, SVSP family member, putative. (481 aa)
	TA10260	Nucleoporin, putative. (1033 aa)
	TA10295	DEAD-box-family helicase, putative. (794 aa)
	TA10820	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (226 aa)
	TA09040	Uncharacterized protein. (330 aa)
	TA08950	Importin-alpha, putative. (1211 aa)
	TA08475	Uncharacterized protein. (250 aa)
	TA08230	Symplekin_C domain-containing protein. (1337 aa)
	TA08190	SLBP_RNA_bind domain-containing protein. (177 aa)
	TA08085	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (937 aa)
	TA07370	Spm1 homologue, putative. (350 aa)
	TA07300	Uncharacterized protein. (317 aa)
	TA07215	Uncharacterized protein. (562 aa)
	TA07135	RAN binding protein 1, putative. (354 aa)
	TA07060	NTP_transf_2 domain-containing protein. (475 aa)
	TA17120	Theileria-specific sub-telomeric protein, SVSP family, putative. (743 aa)
	TA18375	Uncharacterized protein. (941 aa)
	TA05230	Cleavage and polyadenylation specificty factor, subunit, putative. (1282 aa)
	TA04985	RNA-binding protein, putative. (406 aa)
	TA04295	CID domain-containing protein. (349 aa)
	TA03910	Aldo_ket_red domain-containing protein. (929 aa)
	TA03345	NTP_transf_2 domain-containing protein. (501 aa)
	TA05480	Uncharacterized protein. (663 aa)
	TA05465	Uncharacterized protein. (2594 aa)
	TA12750	SLBP_RNA_bind domain-containing protein. (380 aa)
	TA16070	Ubiquitin carboxyl-terminal hydrolase, putative; Belongs to the peptidase C19 family. (382 aa)
	TA11620	Cleavage and polyadenylation specificity factor subunit 2. (830 aa)
	TA11715	Importin-like protein, putative. (1281 aa)
	TA12040	Importin N-terminal domain-containing protein. (1060 aa)
	TA12505	Uncharacterized protein. (678 aa)
	TA12600	Uncharacterized protein. (155 aa)
	TA12675	Uncharacterized protein. (430 aa)
	TA12740	Spm1 (Nucleoporin) protein. (893 aa)
	TA12825	C3H1-type domain-containing protein. (171 aa)
	TA13250	Uncharacterized protein. (556 aa)
	TA14420	Cleavage stimulation factor subunit 1, putative. (345 aa)
	TA14900	CPSF (Cleavage and polyadenylation specific factor), subunit A, putative. (1641 aa)
	TA15720	Uncharacterized protein. (1506 aa)
	TA15960	Aldo-keto reductase family protein, putative. (826 aa)
	TA16030	Theileria-specific sub-telomeric protein, SVSP family, putative. (571 aa)
	TA16045	Theileria-specific sub-telomeric protein, SVSP family, putative. (482 aa)
	TA19770	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (512 aa)
	TA19860	DEAD box RNA helicase, putative; Belongs to the DEAD box helicase family. (501 aa)
	TA19935	Importin beta-1 subunit, putative. (873 aa)
	TA20055	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (707 aa)
	TA19015	Suf domain-containing protein. (929 aa)
	TA19055	SONA homologue, putative. (346 aa)
	TA21430	Importin (Karyopherin) beta, putative. (1312 aa)
	TA03110	Tash-like protein, putative. (619 aa)
	TA03070	Uncharacterized protein. (580 aa)
	TA02905	Uncharacterized protein. (569 aa)
	TA06865	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (211 aa)
	TA06270	Uncharacterized protein. (493 aa)
	TA16630	WD_REPEATS_REGION domain-containing protein. (341 aa)
	TA16385	Uncharacterized protein. (812 aa)
	TA16450	Eukaryotic translation initiation factor eIF2A/WD domain, G-beta repeat, putative. (449 aa)
	TA16555	DNA_LIGASE_A3 domain-containing protein. (439 aa)
	TA09550	SfiI-subtelomeric related protein family member, putative. (217 aa)

Your Current Organism:

Theileria annulata

NCBI taxonomy Id: 5874
Other names: T. annulata

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TA02905	TA09550	Q4UHJ3	Q4UJ21	Uncharacterized protein.	SfiI-subtelomeric related protein family member, putative.	0.491
TA02905	TA10295	Q4UHJ3	Q4U8W5	Uncharacterized protein.	DEAD-box-family helicase, putative.	0.768
TA02905	TA13250	Q4UHJ3	Q4UEF4	Uncharacterized protein.	Uncharacterized protein.	0.691
TA02905	TA15720	Q4UHJ3	Q4UFM9	Uncharacterized protein.	Uncharacterized protein.	0.491
TA02905	TA16385	Q4UHJ3	Q4UIV5	Uncharacterized protein.	Uncharacterized protein.	0.491
TA02905	TA16450	Q4UHJ3	Q4UIW6	Uncharacterized protein.	Eukaryotic translation initiation factor eIF2A/WD domain, G-beta repeat, putative.	0.517
TA03070	TA04295	Q4UHG1	Q4UC48	Uncharacterized protein.	CID domain-containing protein.	0.692
TA03070	TA05465	Q4UHG1	Q4UCR1	Uncharacterized protein.	Uncharacterized protein.	0.437
TA03070	TA05480	Q4UHG1	Q4UCQ8	Uncharacterized protein.	Uncharacterized protein.	0.999
TA03070	TA06270	Q4UHG1	Q4UI88	Uncharacterized protein.	Uncharacterized protein.	0.777
TA03070	TA07135	Q4UHG1	Q4UAB6	Uncharacterized protein.	RAN binding protein 1, putative.	0.571
TA03070	TA07370	Q4UHG1	Q4UA71	Uncharacterized protein.	Spm1 homologue, putative.	0.424
TA03070	TA08230	Q4UHG1	Q4U9R5	Uncharacterized protein.	Symplekin_C domain-containing protein.	0.910
TA03070	TA08475	Q4UHG1	Q4U9L9	Uncharacterized protein.	Uncharacterized protein.	0.813
TA03070	TA09040	Q4UHG1	Q4U9B8	Uncharacterized protein.	Uncharacterized protein.	0.681
TA03070	TA10260	Q4UHG1	Q4U8V8	Uncharacterized protein.	Nucleoporin, putative.	0.424
TA03070	TA10820	Q4UHG1	Q4U960	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.663
TA03070	TA12505	Q4UHG1	Q4UE20	Uncharacterized protein.	Uncharacterized protein.	0.424
TA03070	TA12675	Q4UHG1	Q4UE51	Uncharacterized protein.	Uncharacterized protein.	0.641
TA03070	TA12740	Q4UHG1	Q4UE62	Uncharacterized protein.	Spm1 (Nucleoporin) protein.	0.987