5 items (Theileria annulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TA08545	Spindle pole body component. (728 aa)
	TA18805	Uncharacterized protein. (84 aa)
	TA03470	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (490 aa)
	TA14500	Spindle pole body component. (953 aa)
	TA19150	Spindle pole body component. (823 aa)

Your Current Organism:

Theileria annulata

NCBI taxonomy Id: 5874
Other names: T. annulata

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TA03470	TA08545	Q4UCK3	Q4U9K6	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	Spindle pole body component.	0.999
TA03470	TA14500	Q4UCK3	Q4UF31	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	Spindle pole body component.	0.985
TA03470	TA18805	Q4UCK3	Q4UBC7	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	Uncharacterized protein.	0.836
TA03470	TA19150	Q4UCK3	Q4UGA7	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	Spindle pole body component.	0.999
TA08545	TA03470	Q4U9K6	Q4UCK3	Spindle pole body component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.999
TA08545	TA14500	Q4U9K6	Q4UF31	Spindle pole body component.	Spindle pole body component.	0.994
TA08545	TA18805	Q4U9K6	Q4UBC7	Spindle pole body component.	Uncharacterized protein.	0.719
TA08545	TA19150	Q4U9K6	Q4UGA7	Spindle pole body component.	Spindle pole body component.	0.999
TA14500	TA03470	Q4UF31	Q4UCK3	Spindle pole body component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.985
TA14500	TA08545	Q4UF31	Q4U9K6	Spindle pole body component.	Spindle pole body component.	0.994
TA14500	TA18805	Q4UF31	Q4UBC7	Spindle pole body component.	Uncharacterized protein.	0.748
TA14500	TA19150	Q4UF31	Q4UGA7	Spindle pole body component.	Spindle pole body component.	0.989
TA18805	TA03470	Q4UBC7	Q4UCK3	Uncharacterized protein.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.836
TA18805	TA08545	Q4UBC7	Q4U9K6	Uncharacterized protein.	Spindle pole body component.	0.719
TA18805	TA14500	Q4UBC7	Q4UF31	Uncharacterized protein.	Spindle pole body component.	0.748
TA18805	TA19150	Q4UBC7	Q4UGA7	Uncharacterized protein.	Spindle pole body component.	0.820
TA19150	TA03470	Q4UGA7	Q4UCK3	Spindle pole body component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.999
TA19150	TA08545	Q4UGA7	Q4U9K6	Spindle pole body component.	Spindle pole body component.	0.999
TA19150	TA14500	Q4UGA7	Q4UF31	Spindle pole body component.	Spindle pole body component.	0.989
TA19150	TA18805	Q4UGA7	Q4UBC7	Spindle pole body component.	Uncharacterized protein.	0.820