(14 nodes) Proteasome accessory complex network (Theileria annulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TA06145	26S proteasome regulatory subunit, putative. (1105 aa)
	TA10120	Proteasome subunit, putative. (592 aa)
	TA08355	26S proteasome regulatory subunit, putative; Belongs to the proteasome subunit S1 family. (1041 aa)
	TA08080	VWFA domain-containing protein. (332 aa)
	TA07675	26S proteasome subunit, putative. (364 aa)
	TA07380	26S proteasome (Regulatory) subunit, putative. (298 aa)
	TA17225	26s protease regulatory subunit, putative; Belongs to the AAA ATPase family. (396 aa)
	TA02555	26S proteasome regulatory subunit, putative. (278 aa)
	TA12640	Adhesion regulation modulator (ARM) protein, putative. (124 aa)
	TA15430	Subunit of proteaseome activator complex, putative. (241 aa)
	TA15700	26S proteasome ATPase subunit (Rpt6A homologue), putative; Belongs to the AAA ATPase family. (393 aa)
	TA21405	226S proteasome regulatory particle, putative; Belongs to the AAA ATPase family. (419 aa)
	TA06255	26S proteasome subunit, putative; Belongs to the AAA ATPase family. (435 aa)
	TA05950	26S proteasome subunit 4, putative; Belongs to the AAA ATPase family. (438 aa)

Your Current Organism:

Theileria annulata

NCBI taxonomy Id: 5874
Other names: T. annulata

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TA02555	TA05950	Q4UD14	Q4UI30	26S proteasome regulatory subunit, putative.	26S proteasome subunit 4, putative; Belongs to the AAA ATPase family.	0.999
TA02555	TA06145	Q4UD14	Q4UHP5	26S proteasome regulatory subunit, putative.	26S proteasome regulatory subunit, putative.	0.999
TA02555	TA06255	Q4UD14	Q4UHP7	26S proteasome regulatory subunit, putative.	26S proteasome subunit, putative; Belongs to the AAA ATPase family.	0.999
TA02555	TA07380	Q4UD14	Q4UA69	26S proteasome regulatory subunit, putative.	26S proteasome (Regulatory) subunit, putative.	0.999
TA02555	TA07675	Q4UD14	Q4UA15	26S proteasome regulatory subunit, putative.	26S proteasome subunit, putative.	0.999
TA02555	TA08080	Q4UD14	Q4U9U3	26S proteasome regulatory subunit, putative.	VWFA domain-containing protein.	0.999
TA02555	TA08355	Q4UD14	Q4U9P2	26S proteasome regulatory subunit, putative.	26S proteasome regulatory subunit, putative; Belongs to the proteasome subunit S1 family.	0.999
TA02555	TA10120	Q4UD14	Q4U8T2	26S proteasome regulatory subunit, putative.	Proteasome subunit, putative.	0.999
TA02555	TA12640	Q4UD14	Q4UE44	26S proteasome regulatory subunit, putative.	Adhesion regulation modulator (ARM) protein, putative.	0.998
TA02555	TA15430	Q4UD14	Q4UFH7	26S proteasome regulatory subunit, putative.	Subunit of proteaseome activator complex, putative.	0.630
TA02555	TA15700	Q4UD14	Q4UFM6	26S proteasome regulatory subunit, putative.	26S proteasome ATPase subunit (Rpt6A homologue), putative; Belongs to the AAA ATPase family.	0.999
TA02555	TA17225	Q4UD14	Q4UAQ2	26S proteasome regulatory subunit, putative.	26s protease regulatory subunit, putative; Belongs to the AAA ATPase family.	0.999
TA02555	TA21405	Q4UD14	Q4UGM6	26S proteasome regulatory subunit, putative.	226S proteasome regulatory particle, putative; Belongs to the AAA ATPase family.	0.999
TA05950	TA02555	Q4UI30	Q4UD14	26S proteasome subunit 4, putative; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit, putative.	0.999
TA05950	TA06145	Q4UI30	Q4UHP5	26S proteasome subunit 4, putative; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit, putative.	0.999
TA05950	TA06255	Q4UI30	Q4UHP7	26S proteasome subunit 4, putative; Belongs to the AAA ATPase family.	26S proteasome subunit, putative; Belongs to the AAA ATPase family.	0.999
TA05950	TA07380	Q4UI30	Q4UA69	26S proteasome subunit 4, putative; Belongs to the AAA ATPase family.	26S proteasome (Regulatory) subunit, putative.	0.999
TA05950	TA07675	Q4UI30	Q4UA15	26S proteasome subunit 4, putative; Belongs to the AAA ATPase family.	26S proteasome subunit, putative.	0.999
TA05950	TA08080	Q4UI30	Q4U9U3	26S proteasome subunit 4, putative; Belongs to the AAA ATPase family.	VWFA domain-containing protein.	0.999
TA05950	TA08355	Q4UI30	Q4U9P2	26S proteasome subunit 4, putative; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit, putative; Belongs to the proteasome subunit S1 family.	0.999