(15 nodes) Ubiquitin binding network (Theileria annulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TA06130	DNA repair protein (RAD23 homologue), putative. (328 aa)
	TA06630	Uncharacterized protein. (204 aa)
	TA06640	Uncharacterized protein. (356 aa)
	TA08700	SprT-like family, putative. (234 aa)
	TA04855	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative. (905 aa)
	TA03810	SEP domain-containing protein. (211 aa)
	TA14670	Uncharacterized protein. (703 aa)
	TA12235	Uncharacterized protein. (640 aa)
	TA12640	Adhesion regulation modulator (ARM) protein, putative. (124 aa)
	TA13880	Ubiquitin-like domain-containing protein. (549 aa)
	TA14430	Mitotic checkpoint protein, BUB3 homologue, putative. (333 aa)
	TA19055	SONA homologue, putative. (346 aa)
	TA19160	Ubiquitin regulatory protein, putative. (338 aa)
	TA06765	UEV domain-containing protein. (294 aa)
	TA06985	Uncharacterized protein. (871 aa)

Your Current Organism:

Theileria annulata

NCBI taxonomy Id: 5874
Other names: T. annulata

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TA03810	TA04855	Q4UCE0	Q4UBT9	SEP domain-containing protein.	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	0.988
TA03810	TA06130	Q4UCE0	Q4UI64	SEP domain-containing protein.	DNA repair protein (RAD23 homologue), putative.	0.500
TA03810	TA12235	Q4UCE0	Q4UDX2	SEP domain-containing protein.	Uncharacterized protein.	0.993
TA03810	TA13880	Q4UCE0	Q4UES0	SEP domain-containing protein.	Ubiquitin-like domain-containing protein.	0.736
TA03810	TA19160	Q4UCE0	Q4UGA9	SEP domain-containing protein.	Ubiquitin regulatory protein, putative.	0.839
TA04855	TA03810	Q4UBT9	Q4UCE0	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	SEP domain-containing protein.	0.988
TA04855	TA06130	Q4UBT9	Q4UI64	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	DNA repair protein (RAD23 homologue), putative.	0.793
TA04855	TA08700	Q4UBT9	Q4U9H8	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	SprT-like family, putative.	0.787
TA04855	TA12235	Q4UBT9	Q4UDX2	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	Uncharacterized protein.	0.772
TA04855	TA12640	Q4UBT9	Q4UE44	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	Adhesion regulation modulator (ARM) protein, putative.	0.411
TA04855	TA13880	Q4UBT9	Q4UES0	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	Ubiquitin-like domain-containing protein.	0.990
TA04855	TA19160	Q4UBT9	Q4UGA9	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	Ubiquitin regulatory protein, putative.	0.866
TA06130	TA03810	Q4UI64	Q4UCE0	DNA repair protein (RAD23 homologue), putative.	SEP domain-containing protein.	0.500
TA06130	TA04855	Q4UI64	Q4UBT9	DNA repair protein (RAD23 homologue), putative.	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	0.793
TA06130	TA06630	Q4UI64	Q4UIF5	DNA repair protein (RAD23 homologue), putative.	Uncharacterized protein.	0.608
TA06130	TA06640	Q4UI64	Q4UIF6	DNA repair protein (RAD23 homologue), putative.	Uncharacterized protein.	0.608
TA06130	TA06765	Q4UI64	Q4UHS4	DNA repair protein (RAD23 homologue), putative.	UEV domain-containing protein.	0.735
TA06130	TA08700	Q4UI64	Q4U9H8	DNA repair protein (RAD23 homologue), putative.	SprT-like family, putative.	0.661
TA06130	TA12235	Q4UI64	Q4UDX2	DNA repair protein (RAD23 homologue), putative.	Uncharacterized protein.	0.687
TA06130	TA12640	Q4UI64	Q4UE44	DNA repair protein (RAD23 homologue), putative.	Adhesion regulation modulator (ARM) protein, putative.	0.874