(6 nodes) Nuclear mRNA surveillance network (Theileria annulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TA06325	Exosome complex exonuclease (Rrp46 homologue), putative. (265 aa)
	TA19335	Exosome complex exonuclease, putative. (322 aa)
	TA10935	Uncharacterized protein. (378 aa)
	TA17030	3' exonuclease, exosome component, putative. (254 aa)
	TA20905	Exosome complex exonuclease rrp41, putative. (245 aa)
	TA06285	Exosome ribonuclease PH (Rrp42 homologue), putative. (268 aa)

Your Current Organism:

Theileria annulata

NCBI taxonomy Id: 5874
Other names: T. annulata

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TA06285	TA06325	Q4UI91	Q4UI98	Exosome ribonuclease PH (Rrp42 homologue), putative.	Exosome complex exonuclease (Rrp46 homologue), putative.	0.999
TA06285	TA10935	Q4UI91	Q4U981	Exosome ribonuclease PH (Rrp42 homologue), putative.	Uncharacterized protein.	0.999
TA06285	TA17030	Q4UI91	Q4UIP4	Exosome ribonuclease PH (Rrp42 homologue), putative.	3' exonuclease, exosome component, putative.	0.970
TA06285	TA19335	Q4UI91	Q4UFY0	Exosome ribonuclease PH (Rrp42 homologue), putative.	Exosome complex exonuclease, putative.	0.999
TA06285	TA20905	Q4UI91	Q4UGX4	Exosome ribonuclease PH (Rrp42 homologue), putative.	Exosome complex exonuclease rrp41, putative.	0.970
TA06325	TA06285	Q4UI98	Q4UI91	Exosome complex exonuclease (Rrp46 homologue), putative.	Exosome ribonuclease PH (Rrp42 homologue), putative.	0.999
TA06325	TA10935	Q4UI98	Q4U981	Exosome complex exonuclease (Rrp46 homologue), putative.	Uncharacterized protein.	0.999
TA06325	TA17030	Q4UI98	Q4UIP4	Exosome complex exonuclease (Rrp46 homologue), putative.	3' exonuclease, exosome component, putative.	0.965
TA06325	TA19335	Q4UI98	Q4UFY0	Exosome complex exonuclease (Rrp46 homologue), putative.	Exosome complex exonuclease, putative.	0.999
TA06325	TA20905	Q4UI98	Q4UGX4	Exosome complex exonuclease (Rrp46 homologue), putative.	Exosome complex exonuclease rrp41, putative.	0.965
TA10935	TA06285	Q4U981	Q4UI91	Uncharacterized protein.	Exosome ribonuclease PH (Rrp42 homologue), putative.	0.999
TA10935	TA06325	Q4U981	Q4UI98	Uncharacterized protein.	Exosome complex exonuclease (Rrp46 homologue), putative.	0.999
TA10935	TA17030	Q4U981	Q4UIP4	Uncharacterized protein.	3' exonuclease, exosome component, putative.	0.962
TA10935	TA19335	Q4U981	Q4UFY0	Uncharacterized protein.	Exosome complex exonuclease, putative.	0.999
TA10935	TA20905	Q4U981	Q4UGX4	Uncharacterized protein.	Exosome complex exonuclease rrp41, putative.	0.962
TA17030	TA06285	Q4UIP4	Q4UI91	3' exonuclease, exosome component, putative.	Exosome ribonuclease PH (Rrp42 homologue), putative.	0.970
TA17030	TA06325	Q4UIP4	Q4UI98	3' exonuclease, exosome component, putative.	Exosome complex exonuclease (Rrp46 homologue), putative.	0.965
TA17030	TA10935	Q4UIP4	Q4U981	3' exonuclease, exosome component, putative.	Uncharacterized protein.	0.962
TA17030	TA19335	Q4UIP4	Q4UFY0	3' exonuclease, exosome component, putative.	Exosome complex exonuclease, putative.	0.962
TA19335	TA06285	Q4UFY0	Q4UI91	Exosome complex exonuclease, putative.	Exosome ribonuclease PH (Rrp42 homologue), putative.	0.999