(5 nodes) ER-associated misfolded protein catabolic process network (Theileria annulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TA13670	Ubiquitin fusion degradation protein (UFD1 homologue), putative. (270 aa)
	TA11060	RING-type domain-containing protein. (189 aa)
	TA18135	Nucleoside diphospahte hydrolase, putative. (193 aa)
	TA04855	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative. (905 aa)
	TA16520	Ubiquitin-fusion degradation pathway component, UFD1 homologue, putative. (321 aa)

Your Current Organism:

Theileria annulata

NCBI taxonomy Id: 5874
Other names: T. annulata

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TA04855	TA11060	Q4UBT9	Q4U8G2	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	RING-type domain-containing protein.	0.560
TA04855	TA13670	Q4UBT9	Q4UEN1	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	Ubiquitin fusion degradation protein (UFD1 homologue), putative.	0.820
TA04855	TA16520	Q4UBT9	Q4UIX9	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	Ubiquitin-fusion degradation pathway component, UFD1 homologue, putative.	0.820
TA04855	TA18135	Q4UBT9	Q4UB24	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	Nucleoside diphospahte hydrolase, putative.	0.560
TA11060	TA04855	Q4U8G2	Q4UBT9	RING-type domain-containing protein.	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	0.560
TA13670	TA04855	Q4UEN1	Q4UBT9	Ubiquitin fusion degradation protein (UFD1 homologue), putative.	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	0.820
TA13670	TA16520	Q4UEN1	Q4UIX9	Ubiquitin fusion degradation protein (UFD1 homologue), putative.	Ubiquitin-fusion degradation pathway component, UFD1 homologue, putative.	0.911
TA16520	TA04855	Q4UIX9	Q4UBT9	Ubiquitin-fusion degradation pathway component, UFD1 homologue, putative.	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	0.820
TA16520	TA13670	Q4UIX9	Q4UEN1	Ubiquitin-fusion degradation pathway component, UFD1 homologue, putative.	Ubiquitin fusion degradation protein (UFD1 homologue), putative.	0.911
TA18135	TA04855	Q4UB24	Q4UBT9	Nucleoside diphospahte hydrolase, putative.	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	0.560