STRINGSTRING
TA05230 TA05230 CRK3 CRK3 TA09535 TA09535 TA16505 TA16505 TA16450 TA16450 TA16310 TA16310 TA16170 TA16170 TA16825 TA16825 TA16710 TA16710 TA16630 TA16630 TA06230 TA06230 TA05995 TA05995 TA06995 TA06995 TA06775 TA06775 TA06695 TA06695 TA02880 TA02880 TA03010 TA03010 TA03075 TA03075 TA20110 TA20110 TA20115 TA20115 TA20305 TA20305 TA20345 TA20345 TA20625 TA20625 TA21225 TA21225 TA19500 TA19500 TA19400 TA19400 TA19015 TA19015 TA19000 TA19000 TA19965 TA19965 TA19925 TA19925 TA19875 TA19875 TA19735 TA19735 TA15035 TA15035 TA15820 TA15820 FEN1 FEN1 TA15780 TA15780 TA15345 TA15345 TA15120 TA15120 TA14940 TA14940 TA14685 TA14685 TA14420 TA14420 TA13780 TA13780 TA13640 TA13640 TA13545 TA13545 TA13250 TA13250 TA13230 TA13230 TA12895 TA12895 TA12735 TA12735 TA12660 TA12660 TA12555 TA12555 TA11880 TA11880 TA11840 TA11840 TA11620 TA11620 TA11585 TA11585 TA02635 TA02635 TA04975 TA04975 TA05480 TA05480 TA03235 TA03235 TA03320 TA03320 TA03685 TA03685 TA04075 TA04075 TA04475 TA04475 TA04780 TA04780 TA05130 TA05130 TA05165 TA05165 TA05215 TA05215 TA17590 TA17590 TA18270 TA18270 TA18495 TA18495 TA18690 TA18690 TA18820 TA18820 TA17710 TA17710 TA17760 TA17760 TA18075 TA18075 TA18230 TA18230 TA18370 TA18370 TA18410 TA18410 TA17245 TA17245 TA07670 TA07670 TA07725 TA07725 TA07345 TA07345 TA07735 TA07735 TA07800 TA07800 TA07805 TA07805 TA08230 TA08230 TA08240 TA08240 TA08405 TA08405 TA08475 TA08475 TA08570 TA08570 TA09020 TA09020 TA09025 TA09025 TA09040 TA09040 TA09110 TA09110 TA11045 TA11045 TA10885 TA10885 TA10820 TA10820 TA10610 TA10610 TA10600 TA10600 TA10290 TA10290 TA09960 TA09960 TA09890 TA09890 TA09855 TA09855 TA11370 TA11370 TA10195 TA10195
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TA05230Cleavage and polyadenylation specificty factor, subunit, putative. (1282 aa)
CRK3Cyclin-dependent kinase CRK3 (CDK7 homologue), putative. (411 aa)
TA09535SANT_DAMP1_like domain-containing protein. (357 aa)
TA16505DEAD-box family helicase, putative. (1724 aa)
TA16450Eukaryotic translation initiation factor eIF2A/WD domain, G-beta repeat, putative. (449 aa)
TA16310Kinesin, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (966 aa)
TA16170Transcription factor TFIIE, putative. (398 aa)
TA16825Actin, putative; Belongs to the actin family. (468 aa)
TA16710General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (645 aa)
TA16630WD_REPEATS_REGION domain-containing protein. (341 aa)
TA06230Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. (138 aa)
TA05995DNA repair protein (RAD2 nuclease homologue), putative. (312 aa)
TA06995Transcriptional adaptor (ADA2 homologue), putative. (1146 aa)
TA06775Uncharacterized protein. (602 aa)
TA06695DNA replication licensing factor (MCM5 homologue), putative; Belongs to the MCM family. (770 aa)
TA02880Minichromosome maintenance (MCM), putative; Belongs to the MCM family. (983 aa)
TA03010Uncharacterized protein. (237 aa)
TA03075Transcription initiation factor (TBP homologue), putative. (222 aa)
TA20110C2H2-type domain-containing protein. (291 aa)
TA20115DUF3546 domain-containing protein. (276 aa)
TA20305Transcription elongation factor, putative. (418 aa)
TA20345Possible transcription initiation protein spt4-like, putatve. (230 aa)
TA20625U4/u6 small nuclear ribonucleoprotein, putative. (544 aa)
TA21225Bromodomain protein, putative. (1904 aa)
TA19500DNA-directed RNA polymerase ii, putative. (175 aa)
TA19400Uncharacterized protein. (502 aa)
TA19015Suf domain-containing protein. (929 aa)
TA19000Transcriptional adaptor2-related protein, putative. (610 aa)
TA19965Ubiquitin-related protein, putative. (1736 aa)
TA19925Jumonji family zinc finger protein, putative. (709 aa)
TA19875Uncharacterized protein. (1064 aa)
TA19735DNA-directed RNA polymerase ii, putative. (354 aa)
TA15035Uncharacterized protein. (2184 aa)
TA15820GBP domain-containing protein. (998 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (506 aa)
TA15780Uncharacterized protein. (286 aa)
TA15345Uncharacterized protein. (582 aa)
TA15120Chromatin assembly protein, putative. (372 aa)
TA14940Uncharacterized protein. (307 aa)
TA14685Actin-related protein, putative; Belongs to the actin family. (451 aa)
TA14420Cleavage stimulation factor subunit 1, putative. (345 aa)
TA13780TAFII55_N domain-containing protein. (383 aa)
TA13640CDK-activating kinase assembly factor, putative. (236 aa)
TA13545HSA domain-containing protein. (1089 aa)
TA13250Uncharacterized protein. (556 aa)
TA13230Uncharacterized protein. (555 aa)
TA12895Uncharacterized protein. (926 aa)
TA12735RNA polymerase 16kd subunit, RPB4-like, putative. (130 aa)
TA12660Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (382 aa)
TA12555Histone acetyltransferase, GCN5-like, putative. (391 aa)
TA11880DNA-directed RNA polymerase 2 subunit, putative. (167 aa)
TA11840Bromodomain protein, putative. (846 aa)
TA11620Cleavage and polyadenylation specificity factor subunit 2. (830 aa)
TA11585DNA repair helicase, putative. (770 aa)
TA02635DNA-directed RNA polymerase II, putative. (124 aa)
TA04975Transcription factor TFIIH complex subunit Tfb5, putative. (71 aa)
TA05480Uncharacterized protein. (663 aa)
TA03235DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1678 aa)
TA03320Snrnp splicing factor (U2AF), putative. (486 aa)
TA03685Uncharacterized protein. (299 aa)
TA04075RNA_GG_bind domain-containing protein. (132 aa)
TA04475Uncharacterized protein. (165 aa)
TA04780C2H2-type domain-containing protein. (319 aa)
TA05130Sld5 domain-containing protein. (206 aa)
TA05165Uncharacterized protein. (314 aa)
TA05215Uncharacterized protein. (1365 aa)
TA17590Histone deacetylase family protein, putative. (1598 aa)
TA18270Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (659 aa)
TA18495Uncharacterized protein. (3913 aa)
TA18690Uncharacterized protein. (1347 aa)
TA18820SH2_2 domain-containing protein. (1921 aa)
TA17710Uncharacterized protein. (449 aa)
TA17760TAF domain-containing protein. (648 aa)
TA18075Uncharacterized protein. (2323 aa)
TA18230Histone deacetylase family protein, putative. (878 aa)
TA18370Sld5 domain-containing protein. (459 aa)
TA18410Transcription factor, putative. (926 aa)
TA17245Splicing factor, putative. (380 aa)
TA07670WD_REPEATS_REGION domain-containing protein. (776 aa)
TA07725Uncharacterized protein. (112 aa)
TA07345Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (451 aa)
TA07735CDC73_C domain-containing protein. (406 aa)
TA07800Transcription modulator, putative. (1026 aa)
TA07805Splicing factor, putative. (269 aa)
TA08230Symplekin_C domain-containing protein. (1337 aa)
TA08240Uncharacterized protein. (716 aa)
TA08405YL1_C domain-containing protein. (382 aa)
TA08475Uncharacterized protein. (250 aa)
TA08570RNA polymerase common subunit (Rpb6 homologue), putative. (153 aa)
TA09020Uncharacterized protein. (142 aa)
TA09025Uncharacterized protein. (799 aa)
TA09040Uncharacterized protein. (330 aa)
TA09110Uncharacterized protein. (1429 aa)
TA11045Cyclin, putative; Belongs to the cyclin family. (319 aa)
TA10885SWI/SNF-related chromatin remodelling factor (ISWI homologue), putative. (1972 aa)
TA10820Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (226 aa)
TA10610RuvB-like helicase; Belongs to the RuvB family. (494 aa)
TA10600FAT domain-containing protein. (3913 aa)
TA10290Uncharacterized protein. (229 aa)
TA09960Cell-cycle-related serine/threonine protein kinase, CDK homologue, putative. (548 aa)
TA09890Uncharacterized protein. (3595 aa)
TA09855Microtubule-associated protein (YTM1 homologue), putative. (433 aa)
TA11370Uncharacterized protein. (391 aa)
TA10195DNA-directed RNA polymerase, subunit (RPB5 homologue), putative. (205 aa)
Your Current Organism:
Theileria annulata
NCBI taxonomy Id: 5874
Other names: T. annulata
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