(25 nodes) DNA Damage Bypass network (Theileria annulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TA09840	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2210 aa)
	TA04855	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative. (905 aa)
	TA18630	Replication factor C subunit 1. (961 aa)
	TA16520	Ubiquitin-fusion degradation pathway component, UFD1 homologue, putative. (321 aa)
	TA08125	CBFD_NFYB_HMF domain-containing protein. (182 aa)
	TA06500	Transitional endoplasmic reticulum ATPase (CDC48 homologue), putative. (822 aa)
	TA06690	Ubiquitin, putative. (159 aa)
	TA19595	Damage-specific DNA binding protein 1, putative. (1501 aa)
	TA15860	UmuC domain-containing protein. (667 aa)
	TA14075	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
	TA13880	Ubiquitin-like domain-containing protein. (549 aa)
	TA13670	Ubiquitin fusion degradation protein (UFD1 homologue), putative. (270 aa)
	TA13200	Replication factor A-related protein, putative. (466 aa)
	TA12280	DNA_pol_E_B domain-containing protein. (627 aa)
	TA15495	Replication protein A subunit. (625 aa)
	TA13575	Aaa family ATPase, putative. (881 aa)
	TA03770	ATPase_AAA_core domain-containing protein. (303 aa)
	TA08130	Replication factor C subunit, putative. (347 aa)
	TA08700	SprT-like family, putative. (234 aa)
	TA10160	S27 ribosomal protein, putative. (162 aa)
	TA16165	Ubiquitin/60S ribosomal fusion protein, putative. (131 aa)
	TA17080	Replication factor C subunit, putative. (351 aa)
	TA16350	Replication factor C subunit (RPC2 homologue), putative. (336 aa)
	TA04590	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (274 aa)
	TA04525	Replication factor, putative. (299 aa)

Your Current Organism:

Theileria annulata

NCBI taxonomy Id: 5874
Other names: T. annulata

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TA03770	TA04525	Q4UCE8	Q4UC08	ATPase_AAA_core domain-containing protein.	Replication factor, putative.	0.593
TA03770	TA04590	Q4UCE8	Q4UBZ6	ATPase_AAA_core domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.585
TA03770	TA06690	Q4UCE8	Q4UHQ9	ATPase_AAA_core domain-containing protein.	Ubiquitin, putative.	0.763
TA03770	TA08130	Q4UCE8	Q4U9T3	ATPase_AAA_core domain-containing protein.	Replication factor C subunit, putative.	0.594
TA03770	TA08700	Q4UCE8	Q4U9H8	ATPase_AAA_core domain-containing protein.	SprT-like family, putative.	0.787
TA03770	TA10160	Q4UCE8	Q4U8U0	ATPase_AAA_core domain-containing protein.	S27 ribosomal protein, putative.	0.800
TA03770	TA13200	Q4UCE8	Q4UEE5	ATPase_AAA_core domain-containing protein.	Replication factor A-related protein, putative.	0.510
TA03770	TA13670	Q4UCE8	Q4UEN1	ATPase_AAA_core domain-containing protein.	Ubiquitin fusion degradation protein (UFD1 homologue), putative.	0.820
TA03770	TA13880	Q4UCE8	Q4UES0	ATPase_AAA_core domain-containing protein.	Ubiquitin-like domain-containing protein.	0.908
TA03770	TA14075	Q4UCE8	Q4UEV4	ATPase_AAA_core domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.585
TA03770	TA15495	Q4UCE8	Q4UDF8	ATPase_AAA_core domain-containing protein.	Replication protein A subunit.	0.510
TA03770	TA15860	Q4UCE8	Q4UFQ5	ATPase_AAA_core domain-containing protein.	UmuC domain-containing protein.	0.531
TA03770	TA16165	Q4UCE8	Q4UIR4	ATPase_AAA_core domain-containing protein.	Ubiquitin/60S ribosomal fusion protein, putative.	0.815
TA03770	TA16350	Q4UCE8	Q4UIH2	ATPase_AAA_core domain-containing protein.	Replication factor C subunit (RPC2 homologue), putative.	0.593
TA03770	TA16520	Q4UCE8	Q4UIX9	ATPase_AAA_core domain-containing protein.	Ubiquitin-fusion degradation pathway component, UFD1 homologue, putative.	0.820
TA03770	TA17080	Q4UCE8	Q4UIQ4	ATPase_AAA_core domain-containing protein.	Replication factor C subunit, putative.	0.593
TA03770	TA18630	Q4UCE8	Q4UBG2	ATPase_AAA_core domain-containing protein.	Replication factor C subunit 1.	0.610
TA04525	TA03770	Q4UC08	Q4UCE8	Replication factor, putative.	ATPase_AAA_core domain-containing protein.	0.593
TA04525	TA04590	Q4UC08	Q4UBZ6	Replication factor, putative.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.967
TA04525	TA04855	Q4UC08	Q4UBT9	Replication factor, putative.	Cell divison cycle CDC48 homologue, putative or transitional endoplasmic reticulum ATPase, putative.	0.593