5 items (Theileria annulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TA09890	Uncharacterized protein. (3595 aa)
	TA09850	Uncharacterized protein. (1083 aa)
	TA05190	SET domain-containing protein. (1375 aa)
	TA21435	SET domain-containing protein. (843 aa)
	TA06820	SET domain-containing protein. (490 aa)

Your Current Organism:

Theileria annulata

NCBI taxonomy Id: 5874
Other names: T. annulata

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TA05190	TA06820	Q4UBM9	Q4UHT5	SET domain-containing protein.	SET domain-containing protein.	0.603
TA05190	TA09850	Q4UBM9	Q4U8N4	SET domain-containing protein.	Uncharacterized protein.	0.597
TA05190	TA09890	Q4UBM9	Q4U8P1	SET domain-containing protein.	Uncharacterized protein.	0.614
TA05190	TA21435	Q4UBM9	Q4UGM0	SET domain-containing protein.	SET domain-containing protein.	0.597
TA06820	TA05190	Q4UHT5	Q4UBM9	SET domain-containing protein.	SET domain-containing protein.	0.603
TA09850	TA05190	Q4U8N4	Q4UBM9	Uncharacterized protein.	SET domain-containing protein.	0.597
TA09850	TA09890	Q4U8N4	Q4U8P1	Uncharacterized protein.	Uncharacterized protein.	0.477
TA09890	TA05190	Q4U8P1	Q4UBM9	Uncharacterized protein.	SET domain-containing protein.	0.614
TA09890	TA09850	Q4U8P1	Q4U8N4	Uncharacterized protein.	Uncharacterized protein.	0.477
TA21435	TA05190	Q4UGM0	Q4UBM9	SET domain-containing protein.	SET domain-containing protein.	0.597