(17 nodes) Mismatch repair network (Theileria annulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TA08130	Replication factor C subunit, putative. (347 aa)
	TA09295	Exonuclease 1, putative. (868 aa)
	TA18630	Replication factor C subunit 1. (961 aa)
	TA05175	DNA ligase. (899 aa)
	TA04865	DNA mismatch repair protein, putative. (847 aa)
	TA04590	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (274 aa)
	TA04525	Replication factor, putative. (299 aa)
	TA11650	Uncharacterized protein. (308 aa)
	TA15495	Replication protein A subunit. (625 aa)
	TA13340	DNA polymerase delta small subunit, putative. (437 aa)
	TA14075	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
	TA19305	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1279 aa)
	TA20735	DNA mismatch repair protein msh2, putative. (651 aa)
	TA06860	DNA mismatch repair (MLH1 homologue), putative. (904 aa)
	TA06290	DNA polymerase. (1088 aa)
	TA16350	Replication factor C subunit (RPC2 homologue), putative. (336 aa)
	TA17080	Replication factor C subunit, putative. (351 aa)

Your Current Organism:

Theileria annulata

NCBI taxonomy Id: 5874
Other names: T. annulata

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TA04525	TA04590	Q4UC08	Q4UBZ6	Replication factor, putative.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.967
TA04525	TA04865	Q4UC08	Q4UBT8	Replication factor, putative.	DNA mismatch repair protein, putative.	0.448
TA04525	TA05175	Q4UC08	Q4UBN2	Replication factor, putative.	DNA ligase.	0.859
TA04525	TA06290	Q4UC08	Q4UI92	Replication factor, putative.	DNA polymerase.	0.867
TA04525	TA06860	Q4UC08	Q4UHU3	Replication factor, putative.	DNA mismatch repair (MLH1 homologue), putative.	0.605
TA04525	TA08130	Q4UC08	Q4U9T3	Replication factor, putative.	Replication factor C subunit, putative.	0.999
TA04525	TA09295	Q4UC08	Q4UAE8	Replication factor, putative.	Exonuclease 1, putative.	0.839
TA04525	TA11650	Q4UC08	Q4UD89	Replication factor, putative.	Uncharacterized protein.	0.896
TA04525	TA13340	Q4UC08	Q4UEH2	Replication factor, putative.	DNA polymerase delta small subunit, putative.	0.827
TA04525	TA14075	Q4UC08	Q4UEV4	Replication factor, putative.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.967
TA04525	TA15495	Q4UC08	Q4UDF8	Replication factor, putative.	Replication protein A subunit.	0.807
TA04525	TA16350	Q4UC08	Q4UIH2	Replication factor, putative.	Replication factor C subunit (RPC2 homologue), putative.	0.999
TA04525	TA17080	Q4UC08	Q4UIQ4	Replication factor, putative.	Replication factor C subunit, putative.	0.999
TA04525	TA18630	Q4UC08	Q4UBG2	Replication factor, putative.	Replication factor C subunit 1.	0.999
TA04525	TA19305	Q4UC08	Q4UGD4	Replication factor, putative.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.461
TA04525	TA20735	Q4UC08	Q4UH10	Replication factor, putative.	DNA mismatch repair protein msh2, putative.	0.451
TA04590	TA04525	Q4UBZ6	Q4UC08	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Replication factor, putative.	0.967
TA04590	TA04865	Q4UBZ6	Q4UBT8	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA mismatch repair protein, putative.	0.866
TA04590	TA05175	Q4UBZ6	Q4UBN2	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA ligase.	0.971
TA04590	TA06290	Q4UBZ6	Q4UI92	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA polymerase.	0.962