(11 nodes) snRNA processing network (Theileria parva)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q4N839_THEPA	Uncharacterized protein. (601 aa)
	Q4N7B3_THEPA	Uncharacterized protein. (256 aa)
	Q4N6W8_THEPA	RNase_PH domain-containing protein. (148 aa)
	Q4N656_THEPA	Uncharacterized protein. (263 aa)
	Q4N8J8_THEPA	Uncharacterized protein. (260 aa)
	Q4N8R6_THEPA	Exosome complex exonuclease rrp41, putative. (259 aa)
	Q4N9V6_THEPA	Exosome complex exonuclease rrp45, putative. (276 aa)
	Q4N1X4_THEPA	Uncharacterized protein. (378 aa)
	Q4N0S0_THEPA	Uncharacterized protein. (143 aa)
	Q4N0H3_THEPA	Uncharacterized protein. (678 aa)
	Q4N7C2_THEPA	RNase_PH domain-containing protein. (88 aa)

Your Current Organism:

Theileria parva

NCBI taxonomy Id: 5875
Other names: T. parva

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Q4N0H3_THEPA	Q4N839_THEPA	Q4N0H3	Q4N839	Uncharacterized protein.	Uncharacterized protein.	0.999
Q4N0S0_THEPA	Q4N1X4_THEPA	Q4N0S0	Q4N1X4	Uncharacterized protein.	Uncharacterized protein.	0.999
Q4N0S0_THEPA	Q4N656_THEPA	Q4N0S0	Q4N656	Uncharacterized protein.	Uncharacterized protein.	0.999
Q4N0S0_THEPA	Q4N6W8_THEPA	Q4N0S0	Q4N6W8	Uncharacterized protein.	RNase_PH domain-containing protein.	0.975
Q4N0S0_THEPA	Q4N7B3_THEPA	Q4N0S0	Q4N7B3	Uncharacterized protein.	Uncharacterized protein.	0.999
Q4N0S0_THEPA	Q4N7C2_THEPA	Q4N0S0	Q4N7C2	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
Q4N0S0_THEPA	Q4N8R6_THEPA	Q4N0S0	Q4N8R6	Uncharacterized protein.	Exosome complex exonuclease rrp41, putative.	0.975
Q4N0S0_THEPA	Q4N9V6_THEPA	Q4N0S0	Q4N9V6	Uncharacterized protein.	Exosome complex exonuclease rrp45, putative.	0.999
Q4N1X4_THEPA	Q4N0S0_THEPA	Q4N1X4	Q4N0S0	Uncharacterized protein.	Uncharacterized protein.	0.999
Q4N1X4_THEPA	Q4N656_THEPA	Q4N1X4	Q4N656	Uncharacterized protein.	Uncharacterized protein.	0.999
Q4N1X4_THEPA	Q4N6W8_THEPA	Q4N1X4	Q4N6W8	Uncharacterized protein.	RNase_PH domain-containing protein.	0.970
Q4N1X4_THEPA	Q4N7B3_THEPA	Q4N1X4	Q4N7B3	Uncharacterized protein.	Uncharacterized protein.	0.999
Q4N1X4_THEPA	Q4N7C2_THEPA	Q4N1X4	Q4N7C2	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
Q4N1X4_THEPA	Q4N8R6_THEPA	Q4N1X4	Q4N8R6	Uncharacterized protein.	Exosome complex exonuclease rrp41, putative.	0.970
Q4N1X4_THEPA	Q4N9V6_THEPA	Q4N1X4	Q4N9V6	Uncharacterized protein.	Exosome complex exonuclease rrp45, putative.	0.999
Q4N656_THEPA	Q4N0S0_THEPA	Q4N656	Q4N0S0	Uncharacterized protein.	Uncharacterized protein.	0.999
Q4N656_THEPA	Q4N1X4_THEPA	Q4N656	Q4N1X4	Uncharacterized protein.	Uncharacterized protein.	0.999
Q4N656_THEPA	Q4N6W8_THEPA	Q4N656	Q4N6W8	Uncharacterized protein.	RNase_PH domain-containing protein.	0.974
Q4N656_THEPA	Q4N7B3_THEPA	Q4N656	Q4N7B3	Uncharacterized protein.	Uncharacterized protein.	0.999
Q4N656_THEPA	Q4N7C2_THEPA	Q4N656	Q4N7C2	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999