Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKA21670.1 | AKA23185.1 | PCL1606_02150 | PCL1606_17300 | Chemotaxis protein CheY; Pfam: Response regulator receiver domain; SMART: cheY-homologous receiver domain; SMART: LytTr DNA-binding domain; Pfam: LytTr DNA-binding domain. | Chemotaxis protein CheY; Pfam: His Kinase A (phospho-acceptor) domain; Pfam: HAMP domain; SMART: His Kinase A (phosphoacceptor) domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Pfam: Hpt domain; Pfam: Response regulator receiver domain; SMART: Histidine Phosphotransfer domain; SMART: cheY-homologous receiver domain; PRINTS: Bacterial sensor protein C-terminal signature; SMART: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain; SMART: Histidine kinase-like ATPases. | 0.486 |
| AKA22450.1 | AKA23185.1 | PCL1606_09950 | PCL1606_17300 | ATPase; Pfam: His Kinase A (phospho-acceptor) domain; SMART: Histidine kinase-like ATPases; TIGRFAM: sensory_box: PAS domain S-box protein; PRINTS: Bacterial sensor protein C-terminal signature; SMART: His Kinase A (phosphoacceptor) domain; Pfam: PAS fold; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | Chemotaxis protein CheY; Pfam: His Kinase A (phospho-acceptor) domain; Pfam: HAMP domain; SMART: His Kinase A (phosphoacceptor) domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Pfam: Hpt domain; Pfam: Response regulator receiver domain; SMART: Histidine Phosphotransfer domain; SMART: cheY-homologous receiver domain; PRINTS: Bacterial sensor protein C-terminal signature; SMART: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain; SMART: Histidine kinase-like ATPases. | 0.660 |
| AKA23185.1 | AKA21670.1 | PCL1606_17300 | PCL1606_02150 | Chemotaxis protein CheY; Pfam: His Kinase A (phospho-acceptor) domain; Pfam: HAMP domain; SMART: His Kinase A (phosphoacceptor) domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Pfam: Hpt domain; Pfam: Response regulator receiver domain; SMART: Histidine Phosphotransfer domain; SMART: cheY-homologous receiver domain; PRINTS: Bacterial sensor protein C-terminal signature; SMART: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain; SMART: Histidine kinase-like ATPases. | Chemotaxis protein CheY; Pfam: Response regulator receiver domain; SMART: cheY-homologous receiver domain; SMART: LytTr DNA-binding domain; Pfam: LytTr DNA-binding domain. | 0.486 |
| AKA23185.1 | AKA22450.1 | PCL1606_17300 | PCL1606_09950 | Chemotaxis protein CheY; Pfam: His Kinase A (phospho-acceptor) domain; Pfam: HAMP domain; SMART: His Kinase A (phosphoacceptor) domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Pfam: Hpt domain; Pfam: Response regulator receiver domain; SMART: Histidine Phosphotransfer domain; SMART: cheY-homologous receiver domain; PRINTS: Bacterial sensor protein C-terminal signature; SMART: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain; SMART: Histidine kinase-like ATPases. | ATPase; Pfam: His Kinase A (phospho-acceptor) domain; SMART: Histidine kinase-like ATPases; TIGRFAM: sensory_box: PAS domain S-box protein; PRINTS: Bacterial sensor protein C-terminal signature; SMART: His Kinase A (phosphoacceptor) domain; Pfam: PAS fold; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.660 |
| AKA23185.1 | fliA | PCL1606_17300 | PCL1606_44420 | Chemotaxis protein CheY; Pfam: His Kinase A (phospho-acceptor) domain; Pfam: HAMP domain; SMART: His Kinase A (phosphoacceptor) domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Pfam: Hpt domain; Pfam: Response regulator receiver domain; SMART: Histidine Phosphotransfer domain; SMART: cheY-homologous receiver domain; PRINTS: Bacterial sensor protein C-terminal signature; SMART: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain; SMART: Histidine kinase-like ATPases. | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | 0.569 |
| fliA | AKA23185.1 | PCL1606_44420 | PCL1606_17300 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. | Chemotaxis protein CheY; Pfam: His Kinase A (phospho-acceptor) domain; Pfam: HAMP domain; SMART: His Kinase A (phosphoacceptor) domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Pfam: Hpt domain; Pfam: Response regulator receiver domain; SMART: Histidine Phosphotransfer domain; SMART: cheY-homologous receiver domain; PRINTS: Bacterial sensor protein C-terminal signature; SMART: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain; SMART: Histidine kinase-like ATPases. | 0.569 |