STRINGSTRING
A0BC65_PARTE A0BC65_PARTE A0BFH6_PARTE A0BFH6_PARTE A0BFQ2_PARTE A0BFQ2_PARTE A0BFX1_PARTE A0BFX1_PARTE A0BH34_PARTE A0BH34_PARTE A0BH35_PARTE A0BH35_PARTE A0BIQ0_PARTE A0BIQ0_PARTE A0BJK4_PARTE A0BJK4_PARTE A0BKF0_PARTE A0BKF0_PARTE A0BKF1_PARTE A0BKF1_PARTE A0BKS9_PARTE A0BKS9_PARTE A0BMB8_PARTE A0BMB8_PARTE A0BMP6_PARTE A0BMP6_PARTE A0BN24_PARTE A0BN24_PARTE A0BNB9_PARTE A0BNB9_PARTE A0BP76_PARTE A0BP76_PARTE A0BPG3_PARTE A0BPG3_PARTE A0BPL7_PARTE A0BPL7_PARTE A0BPX8_PARTE A0BPX8_PARTE A0C1P3_PARTE A0C1P3_PARTE A0C2B5_PARTE A0C2B5_PARTE A0C3W1_PARTE A0C3W1_PARTE A0C4N1_PARTE A0C4N1_PARTE MED18 MED18 A0C7G1_PARTE A0C7G1_PARTE A0C9Y4_PARTE A0C9Y4_PARTE A0CAF3_PARTE A0CAF3_PARTE A0CBI3_PARTE A0CBI3_PARTE A0CEE6_PARTE A0CEE6_PARTE A0CGL3_PARTE A0CGL3_PARTE A0CH16_PARTE A0CH16_PARTE A0CIK7_PARTE A0CIK7_PARTE A0CLD4_PARTE A0CLD4_PARTE A0CPS3_PARTE A0CPS3_PARTE A0CRF0_PARTE A0CRF0_PARTE A0CSY4_PARTE A0CSY4_PARTE A0CT88_PARTE A0CT88_PARTE A0CTS4_PARTE A0CTS4_PARTE A0CUH3_PARTE A0CUH3_PARTE A0CUR5_PARTE A0CUR5_PARTE A0CV46_PARTE A0CV46_PARTE A0CXL6_PARTE A0CXL6_PARTE FEN1-1 FEN1-1 FEN1-2 FEN1-2 A0CYG6_PARTE A0CYG6_PARTE A0CYN4_PARTE A0CYN4_PARTE A0CZN4_PARTE A0CZN4_PARTE A0D0I8_PARTE A0D0I8_PARTE A0D236_PARTE A0D236_PARTE A0D4F1_PARTE A0D4F1_PARTE A0DAQ7_PARTE A0DAQ7_PARTE A0DCX6_PARTE A0DCX6_PARTE A0DEK9_PARTE A0DEK9_PARTE A0DFA4_PARTE A0DFA4_PARTE A0DGW1_PARTE A0DGW1_PARTE A0DIK3_PARTE A0DIK3_PARTE A0DJP7_PARTE A0DJP7_PARTE A0DM04_PARTE A0DM04_PARTE A0DMV3_PARTE A0DMV3_PARTE A0DND3_PARTE A0DND3_PARTE A0DPB1_PARTE A0DPB1_PARTE A0DPB2_PARTE A0DPB2_PARTE A0DRL5_PARTE A0DRL5_PARTE A0DS57_PARTE A0DS57_PARTE A0DUM4_PARTE A0DUM4_PARTE A0DX38_PARTE A0DX38_PARTE A0DXQ3_PARTE A0DXQ3_PARTE A0DYM6_PARTE A0DYM6_PARTE A0E2K0_PARTE A0E2K0_PARTE A0E2K1_PARTE A0E2K1_PARTE A0E414_PARTE A0E414_PARTE A0E597_PARTE A0E597_PARTE A0E7B8_PARTE A0E7B8_PARTE A0E7S1_PARTE A0E7S1_PARTE A0E8C3_PARTE A0E8C3_PARTE A0E9J9_PARTE A0E9J9_PARTE A0E9T1_PARTE A0E9T1_PARTE A0EA99_PARTE A0EA99_PARTE A0EAG1_PARTE A0EAG1_PARTE A0EDE1_PARTE A0EDE1_PARTE A0EDI0_PARTE A0EDI0_PARTE A0EFE2_PARTE A0EFE2_PARTE A0EFZ8_PARTE A0EFZ8_PARTE A0EG74_PARTE A0EG74_PARTE A0EG83_PARTE A0EG83_PARTE A0EGE2_PARTE A0EGE2_PARTE A0EHB0_PARTE A0EHB0_PARTE A0EHK8_PARTE A0EHK8_PARTE PTMB.344c PTMB.344c
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0BC65_PARTERep_fac-A_C domain-containing protein. (635 aa)
A0BFH6_PARTEDNA polymerase. (1544 aa)
A0BFQ2_PARTEAAA domain-containing protein. (351 aa)
A0BFX1_PARTEHD domain-containing protein. (217 aa)
A0BH34_PARTEHelicase ATP-binding domain-containing protein. (190 aa)
A0BH35_PARTEATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (667 aa)
A0BIQ0_PARTEDNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1108 aa)
A0BJK4_PARTEDNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1103 aa)
A0BKF0_PARTEUncharacterized protein. (456 aa)
A0BKF1_PARTEUncharacterized protein. (741 aa)
A0BKS9_PARTEUncharacterized protein. (563 aa)
A0BMB8_PARTEUncharacterized protein. (761 aa)
A0BMP6_PARTEDNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family. (568 aa)
A0BN24_PARTEProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
A0BNB9_PARTEDna2 domain-containing protein. (896 aa)
A0BP76_PARTEReplication factor C subunit 1. (807 aa)
A0BPG3_PARTEUncharacterized protein. (452 aa)
A0BPL7_PARTEReplication factor C subunit 1. (929 aa)
A0BPX8_PARTEERCC4 domain-containing protein. (509 aa)
A0C1P3_PARTEDNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (340 aa)
A0C2B5_PARTEUncharacterized protein. (493 aa)
A0C3W1_PARTEUncharacterized protein. (553 aa)
A0C4N1_PARTEDNA_pol_E_B domain-containing protein. (481 aa)
MED18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (388 aa)
A0C7G1_PARTEATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (889 aa)
A0C9Y4_PARTERep_fac-A_C domain-containing protein. (555 aa)
A0CAF3_PARTEAAA domain-containing protein. (340 aa)
A0CBI3_PARTEDNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (337 aa)
A0CEE6_PARTEDNA_MISMATCH_REPAIR_2 domain-containing protein. (724 aa)
A0CGL3_PARTEUmuC domain-containing protein. (509 aa)
A0CH16_PARTEDNA_MISMATCH_REPAIR_2 domain-containing protein. (709 aa)
A0CIK7_PARTEAAA domain-containing protein. (356 aa)
A0CLD4_PARTESAS-6_N domain-containing protein. (591 aa)
A0CPS3_PARTEReplication factor C subunit 1. (933 aa)
A0CRF0_PARTEUncharacterized protein. (368 aa)
A0CSY4_PARTEProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (243 aa)
A0CT88_PARTEDNA_mis_repair domain-containing protein. (623 aa)
A0CTS4_PARTEDNA_MISMATCH_REPAIR_2 domain-containing protein. (724 aa)
A0CUH3_PARTEDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (947 aa)
A0CUR5_PARTEUncharacterized protein. (731 aa)
A0CV46_PARTEAAA_23 domain-containing protein. (1237 aa)
A0CXL6_PARTEUncharacterized protein. (633 aa)
FEN1-1Flap endonuclease 1-1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...] (390 aa)
FEN1-2Flap endonuclease 1-2; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...] (390 aa)
A0CYG6_PARTEDNA polymerase. (980 aa)
A0CYN4_PARTEUncharacterized protein. (632 aa)
A0CZN4_PARTESAS-6_N domain-containing protein. (591 aa)
A0D0I8_PARTEANK_REP_REGION domain-containing protein. (851 aa)
A0D236_PARTEUmuC domain-containing protein. (591 aa)
A0D4F1_PARTEUmuC domain-containing protein. (591 aa)
A0DAQ7_PARTEUmuC domain-containing protein. (521 aa)
A0DCX6_PARTEPI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (1445 aa)
A0DEK9_PARTEDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (859 aa)
A0DFA4_PARTERECA_2 domain-containing protein. (256 aa)
A0DGW1_PARTEDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (949 aa)
A0DIK3_PARTEProtein kinase domain-containing protein. (294 aa)
A0DJP7_PARTEUncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (888 aa)
A0DM04_PARTEUncharacterized protein. (560 aa)
A0DMV3_PARTEDNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1111 aa)
A0DND3_PARTEUncharacterized protein. (570 aa)
A0DPB1_PARTEUncharacterized protein. (341 aa)
A0DPB2_PARTEUncharacterized protein. (725 aa)
A0DRL5_PARTEUncharacterized protein. (311 aa)
A0DS57_PARTEDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (895 aa)
A0DUM4_PARTEMre11_DNA_bind domain-containing protein. (1041 aa)
A0DX38_PARTEUncharacterized protein. (971 aa)
A0DXQ3_PARTEUncharacterized protein. (459 aa)
A0DYM6_PARTEDNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1106 aa)
A0E2K0_PARTEUncharacterized protein. (462 aa)
A0E2K1_PARTEUncharacterized protein. (741 aa)
A0E414_PARTEUncharacterized protein. (873 aa)
A0E597_PARTEMre11_DNA_bind domain-containing protein. (674 aa)
A0E7B8_PARTEUncharacterized protein. (730 aa)
A0E7S1_PARTEUncharacterized protein. (872 aa)
A0E8C3_PARTESAS-6_N domain-containing protein. (466 aa)
A0E9J9_PARTEProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
A0E9T1_PARTEDNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (1084 aa)
A0EA99_PARTEDNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family. (680 aa)
A0EAG1_PARTEUncharacterized protein. (148 aa)
A0EDE1_PARTEBRCA-2_OB1 domain-containing protein. (572 aa)
A0EDI0_PARTEProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
A0EFE2_PARTEDna2 domain-containing protein. (859 aa)
A0EFZ8_PARTEUncharacterized protein. (685 aa)
A0EG74_PARTEDNA primase; Belongs to the eukaryotic-type primase small subunit family. (410 aa)
A0EG83_PARTEAAA domain-containing protein. (384 aa)
A0EGE2_PARTEDNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family. (564 aa)
A0EHB0_PARTEUncharacterized protein. (444 aa)
A0EHK8_PARTEReplication factor C subunit 1. (972 aa)
PTMB.344cDNA mismatch repair protein Msh2, putative. (794 aa)
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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