(6 nodes) DNA polymerase complex network (Paramecium tetraurelia)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0BFH6_PARTE	DNA polymerase. (1544 aa)
	A0C2B5_PARTE	Uncharacterized protein. (493 aa)
	A0C4N1_PARTE	DNA_pol_E_B domain-containing protein. (481 aa)
	A0DPB1_PARTE	Uncharacterized protein. (341 aa)
	A0DXQ3_PARTE	Uncharacterized protein. (459 aa)
	A0EG74_PARTE	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (410 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BFH6_PARTE	A0C2B5_PARTE	A0BFH6	A0C2B5	DNA polymerase.	Uncharacterized protein.	0.996
A0BFH6_PARTE	A0C4N1_PARTE	A0BFH6	A0C4N1	DNA polymerase.	DNA_pol_E_B domain-containing protein.	0.994
A0BFH6_PARTE	A0DPB1_PARTE	A0BFH6	A0DPB1	DNA polymerase.	Uncharacterized protein.	0.962
A0BFH6_PARTE	A0DXQ3_PARTE	A0BFH6	A0DXQ3	DNA polymerase.	Uncharacterized protein.	0.998
A0BFH6_PARTE	A0EG74_PARTE	A0BFH6	A0EG74	DNA polymerase.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.994
A0C2B5_PARTE	A0BFH6_PARTE	A0C2B5	A0BFH6	Uncharacterized protein.	DNA polymerase.	0.996
A0C2B5_PARTE	A0C4N1_PARTE	A0C2B5	A0C4N1	Uncharacterized protein.	DNA_pol_E_B domain-containing protein.	0.999
A0C2B5_PARTE	A0DPB1_PARTE	A0C2B5	A0DPB1	Uncharacterized protein.	Uncharacterized protein.	0.997
A0C2B5_PARTE	A0DXQ3_PARTE	A0C2B5	A0DXQ3	Uncharacterized protein.	Uncharacterized protein.	0.965
A0C2B5_PARTE	A0EG74_PARTE	A0C2B5	A0EG74	Uncharacterized protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.999
A0C4N1_PARTE	A0BFH6_PARTE	A0C4N1	A0BFH6	DNA_pol_E_B domain-containing protein.	DNA polymerase.	0.994
A0C4N1_PARTE	A0C2B5_PARTE	A0C4N1	A0C2B5	DNA_pol_E_B domain-containing protein.	Uncharacterized protein.	0.999
A0C4N1_PARTE	A0DPB1_PARTE	A0C4N1	A0DPB1	DNA_pol_E_B domain-containing protein.	Uncharacterized protein.	0.996
A0C4N1_PARTE	A0DXQ3_PARTE	A0C4N1	A0DXQ3	DNA_pol_E_B domain-containing protein.	Uncharacterized protein.	0.964
A0C4N1_PARTE	A0EG74_PARTE	A0C4N1	A0EG74	DNA_pol_E_B domain-containing protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.999
A0DPB1_PARTE	A0BFH6_PARTE	A0DPB1	A0BFH6	Uncharacterized protein.	DNA polymerase.	0.962
A0DPB1_PARTE	A0C2B5_PARTE	A0DPB1	A0C2B5	Uncharacterized protein.	Uncharacterized protein.	0.997
A0DPB1_PARTE	A0C4N1_PARTE	A0DPB1	A0C4N1	Uncharacterized protein.	DNA_pol_E_B domain-containing protein.	0.996
A0DPB1_PARTE	A0DXQ3_PARTE	A0DPB1	A0DXQ3	Uncharacterized protein.	Uncharacterized protein.	0.998
A0DPB1_PARTE	A0EG74_PARTE	A0DPB1	A0EG74	Uncharacterized protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.996