20 items (Paramecium tetraurelia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0BFA4_PARTE	Poly [ADP-ribose] polymerase. (584 aa)
	A0BXK8_PARTE	Poly [ADP-ribose] polymerase. (571 aa)
	A0BY83_PARTE	VIT domain-containing protein. (309 aa)
	A0BZ73_PARTE	Uncharacterized protein. (541 aa)
	A0BZW0_PARTE	Uncharacterized protein. (454 aa)
	A0CA47_PARTE	Poly [ADP-ribose] polymerase. (598 aa)
	A0CGB1_PARTE	Uncharacterized protein. (400 aa)
	A0CTW4_PARTE	Poly [ADP-ribose] polymerase. (542 aa)
	A0CXH1_PARTE	PARP-type domain-containing protein. (280 aa)
	A0D0J4_PARTE	Uncharacterized protein. (347 aa)
	A0D9X0_PARTE	Uncharacterized protein. (462 aa)
	A0DM45_PARTE	Poly [ADP-ribose] polymerase. (599 aa)
	A0DNH1_PARTE	Poly [ADP-ribose] polymerase. (297 aa)
	A0DV95_PARTE	Uncharacterized protein. (493 aa)
	A0DVP8_PARTE	Uncharacterized protein. (433 aa)
	A0DYX0_PARTE	Poly [ADP-ribose] polymerase. (2367 aa)
	A0E0D0_PARTE	Uncharacterized protein. (432 aa)
	A0E7C3_PARTE	Uncharacterized protein. (508 aa)
	A0EAE4_PARTE	Uncharacterized protein. (517 aa)
	A0EDS2_PARTE	ANK_REP_REGION domain-containing protein. (374 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BFA4_PARTE	A0BZ73_PARTE	A0BFA4	A0BZ73	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.728
A0BFA4_PARTE	A0BZW0_PARTE	A0BFA4	A0BZW0	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.739
A0BFA4_PARTE	A0CGB1_PARTE	A0BFA4	A0CGB1	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.735
A0BFA4_PARTE	A0D0J4_PARTE	A0BFA4	A0D0J4	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.757
A0BFA4_PARTE	A0D9X0_PARTE	A0BFA4	A0D9X0	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.734
A0BFA4_PARTE	A0DV95_PARTE	A0BFA4	A0DV95	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.747
A0BFA4_PARTE	A0DVP8_PARTE	A0BFA4	A0DVP8	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.754
A0BFA4_PARTE	A0E0D0_PARTE	A0BFA4	A0E0D0	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.751
A0BFA4_PARTE	A0E7C3_PARTE	A0BFA4	A0E7C3	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.730
A0BFA4_PARTE	A0EAE4_PARTE	A0BFA4	A0EAE4	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.736
A0BXK8_PARTE	A0BZ73_PARTE	A0BXK8	A0BZ73	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.728
A0BXK8_PARTE	A0BZW0_PARTE	A0BXK8	A0BZW0	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.738
A0BXK8_PARTE	A0CGB1_PARTE	A0BXK8	A0CGB1	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.732
A0BXK8_PARTE	A0D0J4_PARTE	A0BXK8	A0D0J4	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.753
A0BXK8_PARTE	A0D9X0_PARTE	A0BXK8	A0D9X0	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.733
A0BXK8_PARTE	A0DV95_PARTE	A0BXK8	A0DV95	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.746
A0BXK8_PARTE	A0DVP8_PARTE	A0BXK8	A0DVP8	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.753
A0BXK8_PARTE	A0E0D0_PARTE	A0BXK8	A0E0D0	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.749
A0BXK8_PARTE	A0E7C3_PARTE	A0BXK8	A0E7C3	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.730
A0BXK8_PARTE	A0EAE4_PARTE	A0BXK8	A0EAE4	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.734