36 items (Paramecium tetraurelia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0BC54_PARTE	Uncharacterized protein. (493 aa)
	A0BIA2_PARTE	Uncharacterized protein. (284 aa)
	A0BJ79_PARTE	Brix domain-containing protein. (338 aa)
	A0BM58_PARTE	Brix domain-containing protein. (307 aa)
	A0BP41_PARTE	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (1255 aa)
	A0BT35_PARTE	Uncharacterized protein. (259 aa)
	A0BXK3_PARTE	Uncharacterized protein. (416 aa)
	A0BYS9_PARTE	Brix domain-containing protein. (249 aa)
	A0C1F8_PARTE	RRM domain-containing protein. (199 aa)
	A0C2X4_PARTE	WD_REPEATS_REGION domain-containing protein. (380 aa)
	A0C6M2_PARTE	WD_REPEATS_REGION domain-containing protein. (380 aa)
	A0C7R2_PARTE	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (183 aa)
	A0C809_PARTE	CP-type G domain-containing protein. (415 aa)
	A0CHD1_PARTE	CBF domain-containing protein. (599 aa)
	A0CL25_PARTE	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (183 aa)
	A0CUN4_PARTE	Uncharacterized protein. (488 aa)
	A0CUN8_PARTE	RNA helicase. (579 aa)
	A0CUX2_PARTE	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (554 aa)
	A0CYU9_PARTE	Uncharacterized protein. (356 aa)
	A0D0B8_PARTE	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (220 aa)
	A0D1P2_PARTE	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (471 aa)
	A0D5W5_PARTE	Protein MAK16 homolog; Belongs to the MAK16 family. (289 aa)
	A0DC20_PARTE	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (220 aa)
	A0DEJ7_PARTE	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (471 aa)
	A0DKQ7_PARTE	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (656 aa)
	A0DY46_PARTE	Uncharacterized protein. (119 aa)
	A0DYJ1_PARTE	Brix domain-containing protein. (302 aa)
	A0E170_PARTE	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (656 aa)
	A0E192_PARTE	Uncharacterized protein. (515 aa)
	A0E8D3_PARTE	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (366 aa)
	A0E956_PARTE	Uncharacterized protein; Belongs to the DEAD box helicase family. (556 aa)
	A0EE91_PARTE	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (954 aa)
	A0EER5_PARTE	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (902 aa)
	A0EHP8_PARTE	Uncharacterized protein. (539 aa)
	ngp_A80	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (648 aa)
	PTMB.06c	Uncharacterized protein. (500 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BC54_PARTE	A0BIA2_PARTE	A0BC54	A0BIA2	Uncharacterized protein.	Uncharacterized protein.	0.989
A0BC54_PARTE	A0BJ79_PARTE	A0BC54	A0BJ79	Uncharacterized protein.	Brix domain-containing protein.	0.997
A0BC54_PARTE	A0BM58_PARTE	A0BC54	A0BM58	Uncharacterized protein.	Brix domain-containing protein.	0.994
A0BC54_PARTE	A0BP41_PARTE	A0BC54	A0BP41	Uncharacterized protein.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.998
A0BC54_PARTE	A0BT35_PARTE	A0BC54	A0BT35	Uncharacterized protein.	Uncharacterized protein.	0.995
A0BC54_PARTE	A0BXK3_PARTE	A0BC54	A0BXK3	Uncharacterized protein.	Uncharacterized protein.	0.996
A0BC54_PARTE	A0BYS9_PARTE	A0BC54	A0BYS9	Uncharacterized protein.	Brix domain-containing protein.	0.991
A0BC54_PARTE	A0C1F8_PARTE	A0BC54	A0C1F8	Uncharacterized protein.	RRM domain-containing protein.	0.997
A0BC54_PARTE	A0C2X4_PARTE	A0BC54	A0C2X4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
A0BC54_PARTE	A0C6M2_PARTE	A0BC54	A0C6M2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.996
A0BC54_PARTE	A0C7R2_PARTE	A0BC54	A0C7R2	Uncharacterized protein.	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.996
A0BC54_PARTE	A0C809_PARTE	A0BC54	A0C809	Uncharacterized protein.	CP-type G domain-containing protein.	0.996
A0BC54_PARTE	A0CHD1_PARTE	A0BC54	A0CHD1	Uncharacterized protein.	CBF domain-containing protein.	0.977
A0BC54_PARTE	A0CL25_PARTE	A0BC54	A0CL25	Uncharacterized protein.	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.996
A0BC54_PARTE	A0CUN4_PARTE	A0BC54	A0CUN4	Uncharacterized protein.	Uncharacterized protein.	0.996
A0BC54_PARTE	A0CUN8_PARTE	A0BC54	A0CUN8	Uncharacterized protein.	RNA helicase.	0.994
A0BC54_PARTE	A0CUX2_PARTE	A0BC54	A0CUX2	Uncharacterized protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.990
A0BC54_PARTE	A0CYU9_PARTE	A0BC54	A0CYU9	Uncharacterized protein.	Uncharacterized protein.	0.996
A0BC54_PARTE	A0D0B8_PARTE	A0BC54	A0D0B8	Uncharacterized protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.996
A0BC54_PARTE	A0D1P2_PARTE	A0BC54	A0D1P2	Uncharacterized protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.998