(63 nodes) Prp19 complex, and Spliceosomal complex network (Paramecium tetraurelia)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0BCU2_PARTE	Uncharacterized protein. (261 aa)
	A0BDC7_PARTE	WD_REPEATS_REGION domain-containing protein. (244 aa)
	A0BH25_PARTE	PPIase cyclophilin-type domain-containing protein. (489 aa)
	A0BKI9_PARTE	Uncharacterized protein. (486 aa)
	A0BLQ7_PARTE	Cir_N domain-containing protein. (350 aa)
	A0BNI8_PARTE	YTH domain-containing protein. (709 aa)
	A0BPL8_PARTE	Uncharacterized protein. (680 aa)
	A0BQ19_PARTE	RRM domain-containing protein. (344 aa)
	A0BRF8_PARTE	Uncharacterized protein. (544 aa)
	A0BX18_PARTE	Uncharacterized protein. (91 aa)
	A0BX88_PARTE	FHA domain-containing protein. (203 aa)
	A0BYM7_PARTE	Uncharacterized protein. (288 aa)
	A0BZ04_PARTE	Uncharacterized protein. (1006 aa)
	A0C1P1_PARTE	Uncharacterized protein. (227 aa)
	A0C208_PARTE	Uncharacterized protein. (279 aa)
	A0C508_PARTE	PWI domain-containing protein. (171 aa)
	A0C899_PARTE	FHA domain-containing protein. (203 aa)
	A0CBI1_PARTE	Uncharacterized protein. (219 aa)
	A0CBJ3_PARTE	Uncharacterized protein. (101 aa)
	A0CBJ5_PARTE	C3H1-type domain-containing protein. (409 aa)
	A0CCU5_PARTE	Uncharacterized protein. (310 aa)
	A0CEF9_PARTE	WD_REPEATS_REGION domain-containing protein. (540 aa)
	A0CFW0_PARTE	SKIP_SNW domain-containing protein. (388 aa)
	A0CII1_PARTE	Uncharacterized protein. (489 aa)
	A0CLQ1_PARTE	WD_REPEATS_REGION domain-containing protein. (362 aa)
	A0CM05_PARTE	Uncharacterized protein. (1236 aa)
	A0CPB6_PARTE	RRM domain-containing protein. (352 aa)
	A0CPS2_PARTE	Uncharacterized protein. (680 aa)
	A0CQ27_PARTE	Uncharacterized protein. (785 aa)
	A0CQ30_PARTE	WD_REPEATS_REGION domain-containing protein. (501 aa)
	A0CRF5_PARTE	PWI domain-containing protein. (171 aa)
	A0CS16_PARTE	MI domain-containing protein. (768 aa)
	A0CT85_PARTE	Uncharacterized protein. (290 aa)
	A0CTQ2_PARTE	WD_REPEATS_REGION domain-containing protein. (540 aa)
	A0CXT5_PARTE	DUF1716 domain-containing protein. (498 aa)
	A0D280_PARTE	Uncharacterized protein. (659 aa)
	A0D281_PARTE	HA2 domain-containing protein. (364 aa)
	A0D4B2_PARTE	Uncharacterized protein. (1059 aa)
	A0D4P5_PARTE	Uncharacterized protein. (147 aa)
	A0D6I4_PARTE	RRM domain-containing protein. (344 aa)
	A0DH40_PARTE	Uncharacterized protein. (147 aa)
	A0DHE8_PARTE	WD_REPEATS_REGION domain-containing protein. (354 aa)
	A0DKG3_PARTE	Cwf21 domain-containing protein. (223 aa)
	A0DM30_PARTE	WD_REPEATS_REGION domain-containing protein. (658 aa)
	A0DMI8_PARTE	WD_REPEATS_REGION domain-containing protein. (366 aa)
	A0DPK5_PARTE	Uncharacterized protein. (261 aa)
	A0DSN6_PARTE	Uncharacterized protein. (785 aa)
	A0DSP1_PARTE	WD_REPEATS_REGION domain-containing protein. (501 aa)
	A0DUH5_PARTE	Uncharacterized protein. (286 aa)
	A0DW21_PARTE	Uncharacterized protein. (750 aa)
	A0DXT2_PARTE	Uncharacterized protein. (486 aa)
	A0E036_PARTE	Uncharacterized protein. (755 aa)
	A0E0Y9_PARTE	Cwf21 domain-containing protein. (223 aa)
	A0E1S9_PARTE	Slu7 domain-containing protein. (170 aa)
	A0E2N3_PARTE	Uncharacterized protein. (486 aa)
	A0E6G6_PARTE	Uncharacterized protein. (289 aa)
	A0E7I8_PARTE	RRM domain-containing protein. (143 aa)
	A0EAS1_PARTE	WD_REPEATS_REGION domain-containing protein. (579 aa)
	A0EB76_PARTE	G-patch domain-containing protein. (278 aa)
	A0ECF9_PARTE	MI domain-containing protein. (805 aa)
	A0EG16_PARTE	RRM domain-containing protein. (144 aa)
	A0EH21_PARTE	RRM domain-containing protein. (304 aa)
	PTMB.95	Uncharacterized protein. (277 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BCU2_PARTE	A0BDC7_PARTE	A0BCU2	A0BDC7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.954
A0BCU2_PARTE	A0BH25_PARTE	A0BCU2	A0BH25	Uncharacterized protein.	PPIase cyclophilin-type domain-containing protein.	0.987
A0BCU2_PARTE	A0BKI9_PARTE	A0BCU2	A0BKI9	Uncharacterized protein.	Uncharacterized protein.	0.954
A0BCU2_PARTE	A0BLQ7_PARTE	A0BCU2	A0BLQ7	Uncharacterized protein.	Cir_N domain-containing protein.	0.990
A0BCU2_PARTE	A0BNI8_PARTE	A0BCU2	A0BNI8	Uncharacterized protein.	YTH domain-containing protein.	0.933
A0BCU2_PARTE	A0BPL8_PARTE	A0BCU2	A0BPL8	Uncharacterized protein.	Uncharacterized protein.	0.981
A0BCU2_PARTE	A0BQ19_PARTE	A0BCU2	A0BQ19	Uncharacterized protein.	RRM domain-containing protein.	0.931
A0BCU2_PARTE	A0BRF8_PARTE	A0BCU2	A0BRF8	Uncharacterized protein.	Uncharacterized protein.	0.920
A0BCU2_PARTE	A0BX18_PARTE	A0BCU2	A0BX18	Uncharacterized protein.	Uncharacterized protein.	0.862
A0BCU2_PARTE	A0BX88_PARTE	A0BCU2	A0BX88	Uncharacterized protein.	FHA domain-containing protein.	0.923
A0BCU2_PARTE	A0BYM7_PARTE	A0BCU2	A0BYM7	Uncharacterized protein.	Uncharacterized protein.	0.954
A0BCU2_PARTE	A0BZ04_PARTE	A0BCU2	A0BZ04	Uncharacterized protein.	Uncharacterized protein.	0.946
A0BCU2_PARTE	A0C1P1_PARTE	A0BCU2	A0C1P1	Uncharacterized protein.	Uncharacterized protein.	0.991
A0BCU2_PARTE	A0C208_PARTE	A0BCU2	A0C208	Uncharacterized protein.	Uncharacterized protein.	0.990
A0BCU2_PARTE	A0C508_PARTE	A0BCU2	A0C508	Uncharacterized protein.	PWI domain-containing protein.	0.755
A0BCU2_PARTE	A0C899_PARTE	A0BCU2	A0C899	Uncharacterized protein.	FHA domain-containing protein.	0.923
A0BCU2_PARTE	A0CBI1_PARTE	A0BCU2	A0CBI1	Uncharacterized protein.	Uncharacterized protein.	0.991
A0BCU2_PARTE	A0CBJ3_PARTE	A0BCU2	A0CBJ3	Uncharacterized protein.	Uncharacterized protein.	0.946
A0BCU2_PARTE	A0CBJ5_PARTE	A0BCU2	A0CBJ5	Uncharacterized protein.	C3H1-type domain-containing protein.	0.933
A0BCU2_PARTE	A0CCU5_PARTE	A0BCU2	A0CCU5	Uncharacterized protein.	Uncharacterized protein.	0.976