39 items (Paramecium tetraurelia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0BF95_PARTE	Uncharacterized protein. (644 aa)
	A0BFP3_PARTE	MIP-T3 domain-containing protein. (173 aa)
	A0BFP5_PARTE	Uncharacterized protein. (454 aa)
	A0BM11_PARTE	Uncharacterized protein. (129 aa)
	A0BPJ7_PARTE	Uncharacterized protein. (396 aa)
	A0BRY8_PARTE	TPR_REGION domain-containing protein. (566 aa)
	A0BWC0_PARTE	MIP-T3 domain-containing protein. (219 aa)
	A0BWC2_PARTE	Uncharacterized protein. (439 aa)
	A0BXC6_PARTE	Uncharacterized protein. (435 aa)
	A0BXS0_PARTE	Uncharacterized protein. (504 aa)
	A0BXS1_PARTE	Uncharacterized protein. (1180 aa)
	A0BYU6_PARTE	Uncharacterized protein. (402 aa)
	A0C080_PARTE	IFT81_CH domain-containing protein. (684 aa)
	A0C2Y4_PARTE	Uncharacterized protein. (394 aa)
	A0C438_PARTE	Uncharacterized protein. (306 aa)
	A0C439_PARTE	TPR_REGION domain-containing protein. (313 aa)
	A0C6M8_PARTE	Uncharacterized protein. (394 aa)
	A0C863_PARTE	Uncharacterized protein. (435 aa)
	A0CA53_PARTE	Uncharacterized protein. (596 aa)
	A0CEN8_PARTE	Uncharacterized protein. (644 aa)
	A0CHY6_PARTE	Uncharacterized protein. (743 aa)
	A0CPU5_PARTE	Uncharacterized protein. (394 aa)
	A0CZI1_PARTE	Uncharacterized protein. (736 aa)
	A0D617_PARTE	Uncharacterized protein. (1723 aa)
	A0D714_PARTE	Uncharacterized protein. (352 aa)
	A0D9L6_PARTE	IFT81_CH domain-containing protein. (684 aa)
	A0DJV3_PARTE	Uncharacterized protein. (396 aa)
	A0DKU0_PARTE	Uncharacterized protein. (566 aa)
	A0DLY4_PARTE	Uncharacterized protein. (751 aa)
	A0DXJ9_PARTE	Uncharacterized protein. (726 aa)
	A0E2F5_PARTE	Uncharacterized protein. (730 aa)
	A0E6Z2_PARTE	Uncharacterized protein. (393 aa)
	A0E9L0_PARTE	Uncharacterized protein. (298 aa)
	A0EBF4_PARTE	TPR_REGION domain-containing protein. (566 aa)
	A0EBZ5_PARTE	Uncharacterized protein. (280 aa)
	A0EEE9_PARTE	ABC_transp_aux domain-containing protein. (428 aa)
	A0EEM6_PARTE	Uncharacterized protein. (556 aa)
	rab_B78	Rab_B78 protein. (191 aa)
	rab_A78	Rab_A78 protein. (191 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BF95_PARTE	A0BFP3_PARTE	A0BF95	A0BFP3	Uncharacterized protein.	MIP-T3 domain-containing protein.	0.960
A0BF95_PARTE	A0BFP5_PARTE	A0BF95	A0BFP5	Uncharacterized protein.	Uncharacterized protein.	0.960
A0BF95_PARTE	A0BM11_PARTE	A0BF95	A0BM11	Uncharacterized protein.	Uncharacterized protein.	0.847
A0BF95_PARTE	A0BPJ7_PARTE	A0BF95	A0BPJ7	Uncharacterized protein.	Uncharacterized protein.	0.967
A0BF95_PARTE	A0BRY8_PARTE	A0BF95	A0BRY8	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.979
A0BF95_PARTE	A0BWC0_PARTE	A0BF95	A0BWC0	Uncharacterized protein.	MIP-T3 domain-containing protein.	0.960
A0BF95_PARTE	A0BWC2_PARTE	A0BF95	A0BWC2	Uncharacterized protein.	Uncharacterized protein.	0.960
A0BF95_PARTE	A0BXC6_PARTE	A0BF95	A0BXC6	Uncharacterized protein.	Uncharacterized protein.	0.981
A0BF95_PARTE	A0BXS0_PARTE	A0BF95	A0BXS0	Uncharacterized protein.	Uncharacterized protein.	0.976
A0BF95_PARTE	A0BXS1_PARTE	A0BF95	A0BXS1	Uncharacterized protein.	Uncharacterized protein.	0.976
A0BF95_PARTE	A0BYU6_PARTE	A0BF95	A0BYU6	Uncharacterized protein.	Uncharacterized protein.	0.962
A0BF95_PARTE	A0C080_PARTE	A0BF95	A0C080	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.984
A0BF95_PARTE	A0C2Y4_PARTE	A0BF95	A0C2Y4	Uncharacterized protein.	Uncharacterized protein.	0.962
A0BF95_PARTE	A0C438_PARTE	A0BF95	A0C438	Uncharacterized protein.	Uncharacterized protein.	0.543
A0BF95_PARTE	A0C439_PARTE	A0BF95	A0C439	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.543
A0BF95_PARTE	A0C6M8_PARTE	A0BF95	A0C6M8	Uncharacterized protein.	Uncharacterized protein.	0.962
A0BF95_PARTE	A0C863_PARTE	A0BF95	A0C863	Uncharacterized protein.	Uncharacterized protein.	0.981
A0BF95_PARTE	A0CA53_PARTE	A0BF95	A0CA53	Uncharacterized protein.	Uncharacterized protein.	0.543
A0BF95_PARTE	A0CEN8_PARTE	A0BF95	A0CEN8	Uncharacterized protein.	Uncharacterized protein.	0.543
A0BF95_PARTE	A0CHY6_PARTE	A0BF95	A0CHY6	Uncharacterized protein.	Uncharacterized protein.	0.927