5 items (Paramecium tetraurelia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0BXC6_PARTE	Uncharacterized protein. (435 aa)
	A0D9L6_PARTE	IFT81_CH domain-containing protein. (684 aa)
	A0DLY4_PARTE	Uncharacterized protein. (751 aa)
	A0E6Z2_PARTE	Uncharacterized protein. (393 aa)
	A0E9L0_PARTE	Uncharacterized protein. (298 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BXC6_PARTE	A0D9L6_PARTE	A0BXC6	A0D9L6	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.989
A0BXC6_PARTE	A0DLY4_PARTE	A0BXC6	A0DLY4	Uncharacterized protein.	Uncharacterized protein.	0.994
A0BXC6_PARTE	A0E6Z2_PARTE	A0BXC6	A0E6Z2	Uncharacterized protein.	Uncharacterized protein.	0.984
A0BXC6_PARTE	A0E9L0_PARTE	A0BXC6	A0E9L0	Uncharacterized protein.	Uncharacterized protein.	0.999
A0D9L6_PARTE	A0BXC6_PARTE	A0D9L6	A0BXC6	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.989
A0D9L6_PARTE	A0DLY4_PARTE	A0D9L6	A0DLY4	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.997
A0D9L6_PARTE	A0E6Z2_PARTE	A0D9L6	A0E6Z2	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.989
A0D9L6_PARTE	A0E9L0_PARTE	A0D9L6	A0E9L0	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.991
A0DLY4_PARTE	A0BXC6_PARTE	A0DLY4	A0BXC6	Uncharacterized protein.	Uncharacterized protein.	0.994
A0DLY4_PARTE	A0D9L6_PARTE	A0DLY4	A0D9L6	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.997
A0DLY4_PARTE	A0E6Z2_PARTE	A0DLY4	A0E6Z2	Uncharacterized protein.	Uncharacterized protein.	0.993
A0DLY4_PARTE	A0E9L0_PARTE	A0DLY4	A0E9L0	Uncharacterized protein.	Uncharacterized protein.	0.999
A0E6Z2_PARTE	A0BXC6_PARTE	A0E6Z2	A0BXC6	Uncharacterized protein.	Uncharacterized protein.	0.984
A0E6Z2_PARTE	A0D9L6_PARTE	A0E6Z2	A0D9L6	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.989
A0E6Z2_PARTE	A0DLY4_PARTE	A0E6Z2	A0DLY4	Uncharacterized protein.	Uncharacterized protein.	0.993
A0E6Z2_PARTE	A0E9L0_PARTE	A0E6Z2	A0E9L0	Uncharacterized protein.	Uncharacterized protein.	0.988
A0E9L0_PARTE	A0BXC6_PARTE	A0E9L0	A0BXC6	Uncharacterized protein.	Uncharacterized protein.	0.999
A0E9L0_PARTE	A0D9L6_PARTE	A0E9L0	A0D9L6	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.991
A0E9L0_PARTE	A0DLY4_PARTE	A0E9L0	A0DLY4	Uncharacterized protein.	Uncharacterized protein.	0.999
A0E9L0_PARTE	A0E6Z2_PARTE	A0E9L0	A0E6Z2	Uncharacterized protein.	Uncharacterized protein.	0.988