18 items (Paramecium tetraurelia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0BDS1_PARTE	Uncharacterized protein. (362 aa)
	A0BMY1_PARTE	Uncharacterized protein. (548 aa)
	A0BS93_PARTE	Uncharacterized protein. (201 aa)
	A0BUZ0_PARTE	SAS-6_N domain-containing protein. (591 aa)
	A0BVG9_PARTE	Protein kinase domain-containing protein. (441 aa)
	A0CC15_PARTE	RING-type domain-containing protein. (340 aa)
	A0CCS8_PARTE	Uncharacterized protein. (235 aa)
	A0CF78_PARTE	Uncharacterized protein. (378 aa)
	A0CIZ7_PARTE	Protein kinase domain-containing protein. (430 aa)
	A0CX07_PARTE	Protein kinase domain-containing protein. (385 aa)
	A0DK88_PARTE	EGF-like domain-containing protein. (480 aa)
	A0DKX9_PARTE	Uncharacterized protein. (425 aa)
	A0DLD9_PARTE	Uncharacterized protein. (469 aa)
	A0DLR2_PARTE	Uncharacterized protein. (1281 aa)
	A0DW78_PARTE	Uncharacterized protein. (657 aa)
	A0E0R8_PARTE	EGF-like domain-containing protein. (479 aa)
	A0EBR8_PARTE	Uncharacterized protein. (201 aa)
	A0EGJ3_PARTE	Uncharacterized protein. (602 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BDS1_PARTE	A0BMY1_PARTE	A0BDS1	A0BMY1	Uncharacterized protein.	Uncharacterized protein.	0.712
A0BDS1_PARTE	A0BS93_PARTE	A0BDS1	A0BS93	Uncharacterized protein.	Uncharacterized protein.	0.441
A0BDS1_PARTE	A0BUZ0_PARTE	A0BDS1	A0BUZ0	Uncharacterized protein.	SAS-6_N domain-containing protein.	0.405
A0BDS1_PARTE	A0BVG9_PARTE	A0BDS1	A0BVG9	Uncharacterized protein.	Protein kinase domain-containing protein.	0.712
A0BDS1_PARTE	A0CC15_PARTE	A0BDS1	A0CC15	Uncharacterized protein.	RING-type domain-containing protein.	0.961
A0BDS1_PARTE	A0CCS8_PARTE	A0BDS1	A0CCS8	Uncharacterized protein.	Uncharacterized protein.	0.961
A0BDS1_PARTE	A0CIZ7_PARTE	A0BDS1	A0CIZ7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.712
A0BDS1_PARTE	A0CX07_PARTE	A0BDS1	A0CX07	Uncharacterized protein.	Protein kinase domain-containing protein.	0.712
A0BDS1_PARTE	A0DK88_PARTE	A0BDS1	A0DK88	Uncharacterized protein.	EGF-like domain-containing protein.	0.961
A0BDS1_PARTE	A0DLD9_PARTE	A0BDS1	A0DLD9	Uncharacterized protein.	Uncharacterized protein.	0.712
A0BDS1_PARTE	A0DLR2_PARTE	A0BDS1	A0DLR2	Uncharacterized protein.	Uncharacterized protein.	0.712
A0BDS1_PARTE	A0DW78_PARTE	A0BDS1	A0DW78	Uncharacterized protein.	Uncharacterized protein.	0.961
A0BDS1_PARTE	A0E0R8_PARTE	A0BDS1	A0E0R8	Uncharacterized protein.	EGF-like domain-containing protein.	0.961
A0BDS1_PARTE	A0EBR8_PARTE	A0BDS1	A0EBR8	Uncharacterized protein.	Uncharacterized protein.	0.441
A0BDS1_PARTE	A0EGJ3_PARTE	A0BDS1	A0EGJ3	Uncharacterized protein.	Uncharacterized protein.	0.553
A0BMY1_PARTE	A0BDS1_PARTE	A0BMY1	A0BDS1	Uncharacterized protein.	Uncharacterized protein.	0.712
A0BMY1_PARTE	A0BS93_PARTE	A0BMY1	A0BS93	Uncharacterized protein.	Uncharacterized protein.	0.856
A0BMY1_PARTE	A0BUZ0_PARTE	A0BMY1	A0BUZ0	Uncharacterized protein.	SAS-6_N domain-containing protein.	0.955
A0BMY1_PARTE	A0BVG9_PARTE	A0BMY1	A0BVG9	Uncharacterized protein.	Protein kinase domain-containing protein.	0.910
A0BMY1_PARTE	A0CC15_PARTE	A0BMY1	A0CC15	Uncharacterized protein.	RING-type domain-containing protein.	0.957