30 items (Paramecium tetraurelia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0DEU0_PARTE	Uncharacterized protein. (582 aa)
	A0BS22_PARTE	DNA helicase; Belongs to the MCM family. (732 aa)
	A0BNH6_PARTE	DNA helicase; Belongs to the MCM family. (985 aa)
	A0BKU2_PARTE	Uncharacterized protein. (746 aa)
	TDP1	Tyrosyl-DNA phosphodiesterase. (532 aa)
	A0EBI9_PARTE	DNA helicase; Belongs to the MCM family. (697 aa)
	A0E7S1_PARTE	Uncharacterized protein. (872 aa)
	A0E2Y8_PARTE	Uncharacterized protein. (767 aa)
	A0E1B1_PARTE	BHD_3 domain-containing protein. (652 aa)
	A0DTG4_PARTE	Death domain-containing protein. (653 aa)
	A0DPR5_PARTE	Uncharacterized protein. (508 aa)
	A0DH93_PARTE	MCM domain-containing protein; Belongs to the MCM family. (810 aa)
	A0DGR9_PARTE	SF4 helicase domain-containing protein. (992 aa)
	A0DEY9_PARTE	Uncharacterized protein. (138 aa)
	A0DCN1_PARTE	DNA helicase; Belongs to the MCM family. (803 aa)
	A0D7P3_PARTE	DNA polymerase. (1344 aa)
	A0D4V3_PARTE	DNA helicase. (803 aa)
	A0D179_PARTE	Uncharacterized protein. (138 aa)
	A0D0Z9_PARTE	DNA helicase; Belongs to the MCM family. (791 aa)
	A0CYN6_PARTE	Uncharacterized protein. (416 aa)
	A0CV46_PARTE	AAA_23 domain-containing protein. (1237 aa)
	A0CRF0_PARTE	Uncharacterized protein. (368 aa)
	A0CQF3_PARTE	MCM domain-containing protein; Belongs to the MCM family. (575 aa)
	A0CNJ0_PARTE	Uncharacterized protein. (410 aa)
	A0CKE9_PARTE	Uncharacterized protein. (184 aa)
	A0CK34_PARTE	Uncharacterized protein. (290 aa)
	A0C9Q8_PARTE	SF4 helicase domain-containing protein. (990 aa)
	A0C954_PARTE	Uncharacterized protein. (522 aa)
	MED18	Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (388 aa)
	A0BYE9_PARTE	SprT-like domain-containing protein. (341 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BKU2_PARTE	A0BYE9_PARTE	A0BKU2	A0BYE9	Uncharacterized protein.	SprT-like domain-containing protein.	0.542
A0BKU2_PARTE	A0CK34_PARTE	A0BKU2	A0CK34	Uncharacterized protein.	Uncharacterized protein.	0.436
A0BKU2_PARTE	A0CKE9_PARTE	A0BKU2	A0CKE9	Uncharacterized protein.	Uncharacterized protein.	0.664
A0BKU2_PARTE	A0CNJ0_PARTE	A0BKU2	A0CNJ0	Uncharacterized protein.	Uncharacterized protein.	0.664
A0BKU2_PARTE	A0CRF0_PARTE	A0BKU2	A0CRF0	Uncharacterized protein.	Uncharacterized protein.	0.543
A0BKU2_PARTE	A0CV46_PARTE	A0BKU2	A0CV46	Uncharacterized protein.	AAA_23 domain-containing protein.	0.423
A0BKU2_PARTE	A0DTG4_PARTE	A0BKU2	A0DTG4	Uncharacterized protein.	Death domain-containing protein.	0.561
A0BKU2_PARTE	A0E1B1_PARTE	A0BKU2	A0E1B1	Uncharacterized protein.	BHD_3 domain-containing protein.	0.561
A0BKU2_PARTE	A0E7S1_PARTE	A0BKU2	A0E7S1	Uncharacterized protein.	Uncharacterized protein.	0.543
A0BKU2_PARTE	MED18	A0BKU2	A0C501	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.543
A0BNH6_PARTE	A0BS22_PARTE	A0BNH6	A0BS22	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
A0BNH6_PARTE	A0CQF3_PARTE	A0BNH6	A0CQF3	DNA helicase; Belongs to the MCM family.	MCM domain-containing protein; Belongs to the MCM family.	0.540
A0BNH6_PARTE	A0CRF0_PARTE	A0BNH6	A0CRF0	DNA helicase; Belongs to the MCM family.	Uncharacterized protein.	0.596
A0BNH6_PARTE	A0CV46_PARTE	A0BNH6	A0CV46	DNA helicase; Belongs to the MCM family.	AAA_23 domain-containing protein.	0.441
A0BNH6_PARTE	A0D0Z9_PARTE	A0BNH6	A0D0Z9	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
A0BNH6_PARTE	A0D4V3_PARTE	A0BNH6	A0D4V3	DNA helicase; Belongs to the MCM family.	DNA helicase.	0.999
A0BNH6_PARTE	A0D7P3_PARTE	A0BNH6	A0D7P3	DNA helicase; Belongs to the MCM family.	DNA polymerase.	0.998
A0BNH6_PARTE	A0DCN1_PARTE	A0BNH6	A0DCN1	DNA helicase; Belongs to the MCM family.	DNA helicase; Belongs to the MCM family.	0.999
A0BNH6_PARTE	A0DEU0_PARTE	A0BNH6	A0DEU0	DNA helicase; Belongs to the MCM family.	Uncharacterized protein.	0.999
A0BNH6_PARTE	A0DH93_PARTE	A0BNH6	A0DH93	DNA helicase; Belongs to the MCM family.	MCM domain-containing protein; Belongs to the MCM family.	0.999