43 items (Paramecium tetraurelia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0DCQ0_PARTE	Uncharacterized protein. (255 aa)
	A0DBJ5_PARTE	Uncharacterized protein. (311 aa)
	A0CS82_PARTE	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (193 aa)
	A0DBG4_PARTE	Uncharacterized protein. (104 aa)
	A0DAY3_PARTE	Uncharacterized protein. (349 aa)
	A0D8V9_PARTE	Uncharacterized protein. (128 aa)
	A0D073_PARTE	Uncharacterized protein. (604 aa)
	A0CZD4_PARTE	Uncharacterized protein. (602 aa)
	A0CYE4_PARTE	Uncharacterized protein. (259 aa)
	A0CXW1_PARTE	Uncharacterized protein. (256 aa)
	A0CYD8_PARTE	Uncharacterized protein. (250 aa)
	A0CXV6_PARTE	Uncharacterized protein. (270 aa)
	A0CVX7_PARTE	Uncharacterized protein. (449 aa)
	A0CVF5_PARTE	Uncharacterized protein. (188 aa)
	A0CMW7_PARTE	Uncharacterized protein. (315 aa)
	A0CJS0_PARTE	Uncharacterized protein. (315 aa)
	A0CJ62_PARTE	Uncharacterized protein. (3240 aa)
	A0CIB7_PARTE	Uncharacterized protein. (1407 aa)
	A0CCS8_PARTE	Uncharacterized protein. (235 aa)
	A0CC15_PARTE	RING-type domain-containing protein. (340 aa)
	A0C9D6_PARTE	Uncharacterized protein. (451 aa)
	A0CU40_PARTE	Uncharacterized protein. (434 aa)
	A0CTW1_PARTE	Uncharacterized protein. (603 aa)
	A0BGK4_PARTE	Uncharacterized protein. (140 aa)
	A0BG15_PARTE	TYR_PHOSPHATASE_2 domain-containing protein. (514 aa)
	A0BE56_PARTE	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (172 aa)
	A0BSR2_PARTE	Uncharacterized protein. (395 aa)
	A0BIH1_PARTE	Uncharacterized protein. (322 aa)
	A0BGK5_PARTE	Uncharacterized protein. (114 aa)
	A0E5C5_PARTE	Uncharacterized protein. (377 aa)
	A0E6P9_PARTE	Uncharacterized protein. (248 aa)
	A0E9P2_PARTE	Uncharacterized protein. (724 aa)
	A0EAP1_PARTE	Uncharacterized protein. (789 aa)
	A0EGJ3_PARTE	Uncharacterized protein. (602 aa)
	A0EGZ7_PARTE	Uncharacterized protein. (250 aa)
	PTMB.153	Uncharacterized protein. (315 aa)
	A0DXX8_PARTE	Uncharacterized protein. (1330 aa)
	A0DW78_PARTE	Uncharacterized protein. (657 aa)
	A0DR07_PARTE	Uncharacterized protein. (449 aa)
	A0DI88_PARTE	Uncharacterized protein. (487 aa)
	A0DGF3_PARTE	Uncharacterized protein. (452 aa)
	A0DDN9_PARTE	Protein kinase domain-containing protein. (597 aa)
	A0DD51_PARTE	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (181 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BG15_PARTE	A0CC15_PARTE	A0BG15	A0CC15	TYR_PHOSPHATASE_2 domain-containing protein.	RING-type domain-containing protein.	0.746
A0BG15_PARTE	A0CCS8_PARTE	A0BG15	A0CCS8	TYR_PHOSPHATASE_2 domain-containing protein.	Uncharacterized protein.	0.746
A0BG15_PARTE	A0DDN9_PARTE	A0BG15	A0DDN9	TYR_PHOSPHATASE_2 domain-containing protein.	Protein kinase domain-containing protein.	0.501
A0BG15_PARTE	A0DW78_PARTE	A0BG15	A0DW78	TYR_PHOSPHATASE_2 domain-containing protein.	Uncharacterized protein.	0.746
A0BG15_PARTE	A0E9P2_PARTE	A0BG15	A0E9P2	TYR_PHOSPHATASE_2 domain-containing protein.	Uncharacterized protein.	0.728
A0CC15_PARTE	A0BG15_PARTE	A0CC15	A0BG15	RING-type domain-containing protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.746
A0CC15_PARTE	A0CCS8_PARTE	A0CC15	A0CCS8	RING-type domain-containing protein.	Uncharacterized protein.	0.841
A0CC15_PARTE	A0CZD4_PARTE	A0CC15	A0CZD4	RING-type domain-containing protein.	Uncharacterized protein.	0.504
A0CC15_PARTE	A0DW78_PARTE	A0CC15	A0DW78	RING-type domain-containing protein.	Uncharacterized protein.	0.841
A0CC15_PARTE	A0E9P2_PARTE	A0CC15	A0E9P2	RING-type domain-containing protein.	Uncharacterized protein.	0.587
A0CC15_PARTE	A0EGJ3_PARTE	A0CC15	A0EGJ3	RING-type domain-containing protein.	Uncharacterized protein.	0.504
A0CCS8_PARTE	A0BG15_PARTE	A0CCS8	A0BG15	Uncharacterized protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.746
A0CCS8_PARTE	A0CC15_PARTE	A0CCS8	A0CC15	Uncharacterized protein.	RING-type domain-containing protein.	0.841
A0CCS8_PARTE	A0CZD4_PARTE	A0CCS8	A0CZD4	Uncharacterized protein.	Uncharacterized protein.	0.504
A0CCS8_PARTE	A0DW78_PARTE	A0CCS8	A0DW78	Uncharacterized protein.	Uncharacterized protein.	0.841
A0CCS8_PARTE	A0E9P2_PARTE	A0CCS8	A0E9P2	Uncharacterized protein.	Uncharacterized protein.	0.587
A0CCS8_PARTE	A0EGJ3_PARTE	A0CCS8	A0EGJ3	Uncharacterized protein.	Uncharacterized protein.	0.504
A0CJ62_PARTE	A0E9P2_PARTE	A0CJ62	A0E9P2	Uncharacterized protein.	Uncharacterized protein.	0.532
A0CVF5_PARTE	A0DBG4_PARTE	A0CVF5	A0DBG4	Uncharacterized protein.	Uncharacterized protein.	0.539
A0CZD4_PARTE	A0CC15_PARTE	A0CZD4	A0CC15	Uncharacterized protein.	RING-type domain-containing protein.	0.504