STRINGSTRING
A0DIR8_PARTE A0DIR8_PARTE PtUNG PtUNG A0DRN1_PARTE A0DRN1_PARTE A0DPB2_PARTE A0DPB2_PARTE A0DPB1_PARTE A0DPB1_PARTE A0DCH8_PARTE A0DCH8_PARTE A0CYG6_PARTE A0CYG6_PARTE FEN1-2 FEN1-2 FEN1-1 FEN1-1 A0CTD9_PARTE A0CTD9_PARTE A0BZJ9_PARTE A0BZJ9_PARTE A0BQI8_PARTE A0BQI8_PARTE A0BLU9_PARTE A0BLU9_PARTE A0BI40_PARTE A0BI40_PARTE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0DIR8_PARTEDNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (348 aa)
PtUNGUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (271 aa)
A0DRN1_PARTEDNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (348 aa)
A0DPB2_PARTEUncharacterized protein. (725 aa)
A0DPB1_PARTEUncharacterized protein. (341 aa)
A0DCH8_PARTEENDO3c domain-containing protein. (278 aa)
A0CYG6_PARTEDNA polymerase. (980 aa)
FEN1-2Flap endonuclease 1-2; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...] (390 aa)
FEN1-1Flap endonuclease 1-1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...] (390 aa)
A0CTD9_PARTEDNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (374 aa)
A0BZJ9_PARTEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2209 aa)
A0BQI8_PARTEUncharacterized protein. (234 aa)
A0BLU9_PARTEUncharacterized protein. (242 aa)
A0BI40_PARTEUncharacterized protein. (237 aa)
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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