7 items (Paramecium tetraurelia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0DND3_PARTE	Uncharacterized protein. (570 aa)
	A0BNB9_PARTE	Dna2 domain-containing protein. (896 aa)
	A0C3W1_PARTE	Uncharacterized protein. (553 aa)
	FEN1-1	Flap endonuclease 1-1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...] (390 aa)
	FEN1-2	Flap endonuclease 1-2; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...] (390 aa)
	A0DM04_PARTE	Uncharacterized protein. (560 aa)
	A0EFE2_PARTE	Dna2 domain-containing protein. (859 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BNB9_PARTE	A0C3W1_PARTE	A0BNB9	A0C3W1	Dna2 domain-containing protein.	Uncharacterized protein.	0.958
A0BNB9_PARTE	A0DM04_PARTE	A0BNB9	A0DM04	Dna2 domain-containing protein.	Uncharacterized protein.	0.958
A0BNB9_PARTE	A0DND3_PARTE	A0BNB9	A0DND3	Dna2 domain-containing protein.	Uncharacterized protein.	0.958
A0BNB9_PARTE	A0EFE2_PARTE	A0BNB9	A0EFE2	Dna2 domain-containing protein.	Dna2 domain-containing protein.	0.900
A0BNB9_PARTE	FEN1-1	A0BNB9	A0CXT3	Dna2 domain-containing protein.	Flap endonuclease 1-1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...]	0.984
A0BNB9_PARTE	FEN1-2	A0BNB9	A0CYG2	Dna2 domain-containing protein.	Flap endonuclease 1-2; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...]	0.984
A0C3W1_PARTE	A0BNB9_PARTE	A0C3W1	A0BNB9	Uncharacterized protein.	Dna2 domain-containing protein.	0.958
A0C3W1_PARTE	A0DM04_PARTE	A0C3W1	A0DM04	Uncharacterized protein.	Uncharacterized protein.	0.915
A0C3W1_PARTE	A0DND3_PARTE	A0C3W1	A0DND3	Uncharacterized protein.	Uncharacterized protein.	0.915
A0C3W1_PARTE	A0EFE2_PARTE	A0C3W1	A0EFE2	Uncharacterized protein.	Dna2 domain-containing protein.	0.958
A0C3W1_PARTE	FEN1-1	A0C3W1	A0CXT3	Uncharacterized protein.	Flap endonuclease 1-1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...]	0.882
A0C3W1_PARTE	FEN1-2	A0C3W1	A0CYG2	Uncharacterized protein.	Flap endonuclease 1-2; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...]	0.882
A0DM04_PARTE	A0BNB9_PARTE	A0DM04	A0BNB9	Uncharacterized protein.	Dna2 domain-containing protein.	0.958
A0DM04_PARTE	A0C3W1_PARTE	A0DM04	A0C3W1	Uncharacterized protein.	Uncharacterized protein.	0.915
A0DM04_PARTE	A0DND3_PARTE	A0DM04	A0DND3	Uncharacterized protein.	Uncharacterized protein.	0.900
A0DM04_PARTE	A0EFE2_PARTE	A0DM04	A0EFE2	Uncharacterized protein.	Dna2 domain-containing protein.	0.958
A0DM04_PARTE	FEN1-1	A0DM04	A0CXT3	Uncharacterized protein.	Flap endonuclease 1-1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...]	0.882
A0DM04_PARTE	FEN1-2	A0DM04	A0CYG2	Uncharacterized protein.	Flap endonuclease 1-2; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...]	0.882
A0DND3_PARTE	A0BNB9_PARTE	A0DND3	A0BNB9	Uncharacterized protein.	Dna2 domain-containing protein.	0.958
A0DND3_PARTE	A0C3W1_PARTE	A0DND3	A0C3W1	Uncharacterized protein.	Uncharacterized protein.	0.915