21 items (Paramecium tetraurelia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0CYG1_PARTE	Enkurin domain-containing protein. (267 aa)
	A0BCK6_PARTE	Enkurin domain-containing protein. (267 aa)
	A0BRP9_PARTE	Uncharacterized protein. (276 aa)
	A0C080_PARTE	IFT81_CH domain-containing protein. (684 aa)
	A0C2G0_PARTE	Uncharacterized protein. (276 aa)
	A0CDI0_PARTE	Uncharacterized protein. (808 aa)
	A0CRP3_PARTE	Enkurin domain-containing protein. (269 aa)
	A0CUF0_PARTE	Enkurin domain-containing protein. (178 aa)
	A0CXT4_PARTE	Enkurin domain-containing protein. (267 aa)
	A0CZF5_PARTE	Enkurin domain-containing protein. (266 aa)
	A0D1J6_PARTE	Enkurin domain-containing protein. (184 aa)
	A0D405_PARTE	Uncharacterized protein. (824 aa)
	A0D4Y6_PARTE	Uncharacterized protein. (372 aa)
	A0D9L6_PARTE	IFT81_CH domain-containing protein. (684 aa)
	A0DEP0_PARTE	Enkurin domain-containing protein. (203 aa)
	A0DFH5_PARTE	Uncharacterized protein. (808 aa)
	A0DHC8_PARTE	Uncharacterized protein. (372 aa)
	A0DIA2_PARTE	Uncharacterized protein. (844 aa)
	A0DMV4_PARTE	Uncharacterized protein. (269 aa)
	A0DMV5_PARTE	Uncharacterized protein. (549 aa)
	A0DPA8_PARTE	Enkurin domain-containing protein. (267 aa)

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BRP9_PARTE	A0CDI0_PARTE	A0BRP9	A0CDI0	Uncharacterized protein.	Uncharacterized protein.	0.619
A0BRP9_PARTE	A0D405_PARTE	A0BRP9	A0D405	Uncharacterized protein.	Uncharacterized protein.	0.619
A0BRP9_PARTE	A0DFH5_PARTE	A0BRP9	A0DFH5	Uncharacterized protein.	Uncharacterized protein.	0.619
A0BRP9_PARTE	A0DIA2_PARTE	A0BRP9	A0DIA2	Uncharacterized protein.	Uncharacterized protein.	0.611
A0BRP9_PARTE	A0DMV4_PARTE	A0BRP9	A0DMV4	Uncharacterized protein.	Uncharacterized protein.	0.611
A0BRP9_PARTE	A0DMV5_PARTE	A0BRP9	A0DMV5	Uncharacterized protein.	Uncharacterized protein.	0.611
A0C080_PARTE	A0D9L6_PARTE	A0C080	A0D9L6	IFT81_CH domain-containing protein.	IFT81_CH domain-containing protein.	0.543
A0C2G0_PARTE	A0CDI0_PARTE	A0C2G0	A0CDI0	Uncharacterized protein.	Uncharacterized protein.	0.619
A0C2G0_PARTE	A0D405_PARTE	A0C2G0	A0D405	Uncharacterized protein.	Uncharacterized protein.	0.619
A0C2G0_PARTE	A0DFH5_PARTE	A0C2G0	A0DFH5	Uncharacterized protein.	Uncharacterized protein.	0.619
A0C2G0_PARTE	A0DIA2_PARTE	A0C2G0	A0DIA2	Uncharacterized protein.	Uncharacterized protein.	0.611
A0C2G0_PARTE	A0DMV4_PARTE	A0C2G0	A0DMV4	Uncharacterized protein.	Uncharacterized protein.	0.611
A0C2G0_PARTE	A0DMV5_PARTE	A0C2G0	A0DMV5	Uncharacterized protein.	Uncharacterized protein.	0.611
A0CDI0_PARTE	A0BRP9_PARTE	A0CDI0	A0BRP9	Uncharacterized protein.	Uncharacterized protein.	0.619
A0CDI0_PARTE	A0C2G0_PARTE	A0CDI0	A0C2G0	Uncharacterized protein.	Uncharacterized protein.	0.619
A0CDI0_PARTE	A0DIA2_PARTE	A0CDI0	A0DIA2	Uncharacterized protein.	Uncharacterized protein.	0.593
A0CDI0_PARTE	A0DMV4_PARTE	A0CDI0	A0DMV4	Uncharacterized protein.	Uncharacterized protein.	0.593
A0CDI0_PARTE	A0DMV5_PARTE	A0CDI0	A0DMV5	Uncharacterized protein.	Uncharacterized protein.	0.677
A0D405_PARTE	A0BRP9_PARTE	A0D405	A0BRP9	Uncharacterized protein.	Uncharacterized protein.	0.619
A0D405_PARTE	A0C2G0_PARTE	A0D405	A0C2G0	Uncharacterized protein.	Uncharacterized protein.	0.619